BLASTX nr result

ID: Lithospermum22_contig00026800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026800
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot...   149   3e-34
ref|XP_004137154.1| PREDICTED: DNA replication complex GINS prot...   144   7e-33
ref|XP_003565172.1| PREDICTED: DNA replication complex GINS prot...   141   5e-32
ref|XP_002315220.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...   137   9e-31

>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
           vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
           product [Vitis vinifera]
          Length = 210

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/86 (83%), Positives = 76/86 (88%)
 Frame = -3

Query: 260 MASQSDSNNSAFSAPEMEFLAEDELIEIVPNMRMDTLNLICGDFGPFYPQIATQVPLWLA 81
           MA QSD   S FSA E+EFL EDE++EIVPNMRMD LNLICGDFGPF PQIATQVPLWLA
Sbjct: 1   MAGQSDPYISLFSAQEVEFLGEDEMVEIVPNMRMDPLNLICGDFGPFRPQIATQVPLWLA 60

Query: 80  VALKKRGKCTIRPPEWMSVEKLTPVL 3
           VALKKRGKCTIRPPEWMSV+KLT VL
Sbjct: 61  VALKKRGKCTIRPPEWMSVDKLTQVL 86


>ref|XP_004137154.1| PREDICTED: DNA replication complex GINS protein PSF2-like [Cucumis
           sativus] gi|449528599|ref|XP_004171291.1| PREDICTED: DNA
           replication complex GINS protein PSF2-like [Cucumis
           sativus]
          Length = 212

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/86 (75%), Positives = 78/86 (90%)
 Frame = -3

Query: 260 MASQSDSNNSAFSAPEMEFLAEDELIEIVPNMRMDTLNLICGDFGPFYPQIATQVPLWLA 81
           MA QSD + + FSA E+EF+AEDE++EI+PNMRMD+L+LICGD+GPFYPQIAT+VPLWLA
Sbjct: 1   MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLA 60

Query: 80  VALKKRGKCTIRPPEWMSVEKLTPVL 3
           +ALKKRGKC IR PEWMSVEKLT +L
Sbjct: 61  IALKKRGKCAIRTPEWMSVEKLTQIL 86


>ref|XP_003565172.1| PREDICTED: DNA replication complex GINS protein PSF2-like
           [Brachypodium distachyon]
          Length = 212

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/86 (74%), Positives = 78/86 (90%)
 Frame = -3

Query: 260 MASQSDSNNSAFSAPEMEFLAEDELIEIVPNMRMDTLNLICGDFGPFYPQIATQVPLWLA 81
           MA QSD + S FS  E+EF+AEDE++EIVPN+RM+ LN+ICGDFGPF+PQIA++VPLWLA
Sbjct: 1   MAGQSDPHLSLFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60

Query: 80  VALKKRGKCTIRPPEWMSVEKLTPVL 3
           VALK+RGKCTIRPPEWM+VE+LT VL
Sbjct: 61  VALKRRGKCTIRPPEWMTVERLTQVL 86


>ref|XP_002315220.1| predicted protein [Populus trichocarpa] gi|222864260|gb|EEF01391.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = -3

Query: 260 MASQSDSNNSAFSAPEMEFLAEDELIEIVPNMRMDTLNLICGDFGPFYPQIATQVPLWLA 81
           MA QSDS  S FS+ E+EF+AEDE++EIVPN+RMD+LN ICGD+GPFYPQ+A QVP+WLA
Sbjct: 1   MAGQSDSTMSLFSSEEIEFMAEDEMVEIVPNLRMDSLNFICGDYGPFYPQLAAQVPIWLA 60

Query: 80  VALKKRGKCTIRPPEWMSVEKLTPVL 3
           +ALKKRGKCTIR P+WMS+E LT VL
Sbjct: 61  LALKKRGKCTIRLPQWMSIENLTQVL 86


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/86 (72%), Positives = 77/86 (89%)
 Frame = -3

Query: 260 MASQSDSNNSAFSAPEMEFLAEDELIEIVPNMRMDTLNLICGDFGPFYPQIATQVPLWLA 81
           MA QSD + S FS  E+EF+AEDE++EIVPN+RM+ LN+ICGDFGPF+PQIA++VPLWLA
Sbjct: 1   MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60

Query: 80  VALKKRGKCTIRPPEWMSVEKLTPVL 3
           VALKKRGKCTIR P+WM+V++LT VL
Sbjct: 61  VALKKRGKCTIRTPDWMTVDRLTQVL 86


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