BLASTX nr result
ID: Lithospermum22_contig00026790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00026790
(476 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp.... 206 2e-51
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 205 4e-51
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c... 204 5e-51
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar... 204 5e-51
dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana] 203 1e-50
>ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 206 bits (523), Expect = 2e-51
Identities = 98/158 (62%), Positives = 120/158 (75%)
Frame = -3
Query: 474 DRAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFGMLRGRFRCDTISYNIIV 295
D+AVK+FL+MHEHGC QDL FNT LDVLCKS++ E AY+LF LRGRF DT++YN+IV
Sbjct: 141 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIV 200
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVE 115
NG+CLI +T KALE+LKEMVDRG+ P+L++YNTML+GFFRAGQ+++AWEFFL+MK+R E
Sbjct: 201 NGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCE 260
Query: 114 IDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
ID R R VFDEM GVLPSV
Sbjct: 261 IDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSV 298
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Frame = -3
Query: 471 RAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFG-MLRGRFRCDTISYNIIV 295
+A + FL M + C D++ + T + + + + +F M+R +YN +
Sbjct: 246 QAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFI 305
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVE 115
C + A+ + +EMV +G EP++++YN +++G F AG+ E +M+ E
Sbjct: 306 QVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCE 365
Query: 114 IDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
+ +A +F++M LP++
Sbjct: 366 PNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNL 403
>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 205 bits (521), Expect = 4e-51
Identities = 100/158 (63%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Frame = -3
Query: 474 DRAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYK-LFGMLRGRFRCDTISYNII 298
DRA+KVFLSM EHGC QDL FNT LD+LCKS++ EMAY LF +LRG+F+ D +SYNII
Sbjct: 164 DRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNII 223
Query: 297 VNGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKV 118
NG+CLI +T KALE+LKEMV+RGL P++++YN +LKG+FRAGQLKEAWEFFLQMK R+V
Sbjct: 224 ANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREV 283
Query: 117 EIDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPS 4
EID RARKVF+EM G G+LPS
Sbjct: 284 EIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPS 321
Score = 61.2 bits (147), Expect = 8e-08
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = -3
Query: 468 AVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFGMLRGR-FRCDTISYNIIVN 292
A + FL M E D++ + T + + + A K+F + G T +YN ++
Sbjct: 271 AWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQ 330
Query: 291 GFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVEI 112
C + A+ + +EMV +G P+L++YN +++G F AG + +A EF +MK E
Sbjct: 331 VLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEP 390
Query: 111 DXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
+ + +F++M G G LP++
Sbjct: 391 NVQTYNVAIRYFCDAGDVEKGLSMFEKM-GQGSLPNL 426
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = -3
Query: 471 RAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLF-GMLRGRFRCDTISYNIIV 295
RA KVF M G +N + VLCK E A +F M++ + + +YN+++
Sbjct: 305 RARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVI 364
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQM 133
G +KA+E ++ M G EP++ +YN ++ F AG +++ F +M
Sbjct: 365 RGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM 418
>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 204 bits (520), Expect = 5e-51
Identities = 98/158 (62%), Positives = 120/158 (75%)
Frame = -3
Query: 474 DRAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFGMLRGRFRCDTISYNIIV 295
D+AVK+FL+MHEHGC QDL FNT LDVLCKS++ E AY+LF LRGRF DT++YN+I+
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 202
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVE 115
NG+CLI +T KALE+LKEMV+RG+ P+L++YNTMLKGFFRAGQ++ AWEFFL+MK+R E
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 114 IDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
ID RAR VFDEM GVLPSV
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = -3
Query: 468 AVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFG-MLRGRFRCDTISYNIIVN 292
A + FL M + C D++ + T + + + + A +F M+R +YN ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 291 GFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVEI 112
C + A+ + +EMV RG EP++++YN +++G F AG+ E +M+ E
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 111 DXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
+ +A +F++M LP++
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 204 bits (520), Expect = 5e-51
Identities = 98/158 (62%), Positives = 120/158 (75%)
Frame = -3
Query: 474 DRAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFGMLRGRFRCDTISYNIIV 295
D+AVK+FL+MHEHGC QDL FNT LDVLCKS++ E AY+LF LRGRF DT++YN+I+
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 202
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVE 115
NG+CLI +T KALE+LKEMV+RG+ P+L++YNTMLKGFFRAGQ++ AWEFFL+MK+R E
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 114 IDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
ID RAR VFDEM GVLPSV
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = -3
Query: 468 AVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFG-MLRGRFRCDTISYNIIVN 292
A + FL M + C D++ + T + + + + A +F M+R +YN ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 291 GFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVEI 112
C + A+ + +EMV RG EP++++YN +++G F AG+ E +M+ E
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 111 DXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
+ +A +F++M LP++
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
>dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 203 bits (516), Expect = 1e-50
Identities = 97/158 (61%), Positives = 119/158 (75%)
Frame = -3
Query: 474 DRAVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFGMLRGRFRCDTISYNIIV 295
D+AVK+FL+MHEHGC QDL FNT LDVLCKS++ E AY+LF LRGRF DT++YN+I+
Sbjct: 137 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 196
Query: 294 NGFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVE 115
NG+CLI +T K LE+LKEMV+RG+ P+L++YNTMLKGFFRAGQ++ AWEFFL+MK+R E
Sbjct: 197 NGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 256
Query: 114 IDXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
ID RAR VFDEM GVLPSV
Sbjct: 257 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 294
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = -3
Query: 468 AVKVFLSMHEHGCRQDLIVFNTFLDVLCKSRKAEMAYKLFG-MLRGRFRCDTISYNIIVN 292
A + FL M + C D++ + T + + + + A +F M+R +YN ++
Sbjct: 243 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 302
Query: 291 GFCLINKTNKALEILKEMVDRGLEPSLSSYNTMLKGFFRAGQLKEAWEFFLQMKRRKVEI 112
C + A+ + +EMV RG EP++++YN +++G F AG+ E +M+ E
Sbjct: 303 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 362
Query: 111 DXXXXXXXXXXXXXXXXXVRARKVFDEMTGAGVLPSV 1
+ +A +F++M LP++
Sbjct: 363 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 399