BLASTX nr result

ID: Lithospermum22_contig00026779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026779
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI17228.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
emb|CBI36352.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 59/73 (80%)
 Frame = -2

Query: 219 VAGDQTHNFSRAICSKLDEITAGTRQLGYMPETEWVLHNIEEEEKEDALGNHSEKLALAF 40
           VAGD  H  +  I  KL+EITA  +Q GYMPET WVLHNIEEEEKEDALG+HSEKLALAF
Sbjct: 558 VAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAF 617

Query: 39  GLISTGPGVTIRI 1
           GLIST PG TIRI
Sbjct: 618 GLISTAPGSTIRI 630


>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 59/73 (80%)
 Frame = -2

Query: 219 VAGDQTHNFSRAICSKLDEITAGTRQLGYMPETEWVLHNIEEEEKEDALGNHSEKLALAF 40
           VAGD  H  +  I  KL+EITA  +Q GYMPET WVLHNIEEEEKEDALG+HSEKLALAF
Sbjct: 471 VAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAF 530

Query: 39  GLISTGPGVTIRI 1
           GLIST PG TIRI
Sbjct: 531 GLISTAPGSTIRI 543


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = -2

Query: 219 VAGDQTHNFSRAICSKLDEITAGTRQLGYMPETEWVLHNIEEEEKEDALGNHSEKLALAF 40
           V+GD  H  S+AIC KL+EI AG  + GY+P TEWVLHN+E+EEKED LG+H EKLALAF
Sbjct: 600 VSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAF 659

Query: 39  GLISTGPGVTIRI 1
            LI T PG+TIRI
Sbjct: 660 ALICTSPGMTIRI 672


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -2

Query: 219 VAGDQTHNFSRAICSKLDEITAGTRQLGYMPETEWVLHNIEEEEKEDALGNHSEKLALAF 40
           VAGD THN +  I SKLDEI+A  R+ GY  E E VLHNIEEEEKE+ALG HSEKLALAF
Sbjct: 560 VAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAF 619

Query: 39  GLISTGPGVTIRI 1
           G++ST PG T+RI
Sbjct: 620 GIVSTRPGTTVRI 632


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/73 (61%), Positives = 54/73 (73%)
 Frame = -2

Query: 219 VAGDQTHNFSRAICSKLDEITAGTRQLGYMPETEWVLHNIEEEEKEDALGNHSEKLALAF 40
           VAGDQ H  S+ I SKLDE++   +  GY P+T  V  +I EEEKE A+  HSEKLA+AF
Sbjct: 486 VAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAF 545

Query: 39  GLISTGPGVTIRI 1
           GLIS+GPGVTIRI
Sbjct: 546 GLISSGPGVTIRI 558


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