BLASTX nr result
ID: Lithospermum22_contig00026763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00026763
(1538 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 214 5e-53
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 214 5e-53
ref|NP_001235160.1| gag-protease polyprotein [Glycine max] gi|74... 212 2e-52
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 209 2e-51
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 208 3e-51
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 214 bits (545), Expect = 5e-53
Identities = 155/444 (34%), Positives = 216/444 (48%), Gaps = 50/444 (11%)
Frame = +2
Query: 11 AKEAWETLACVFEGTHKVRVCRLQFLTTKFENLRMKEDETIIEFIIKLKEISNEFYDLGE 190
AK+AWE L EGT KV++ RLQ L TKFENL+MKE+E I EF + + EI+N LGE
Sbjct: 78 AKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHEFHMNILEIANACTALGE 137
Query: 191 IMSEEKIVRKILRSLPNRFDSKVVVIEEANDISIMKVDELFGSLITFEMSLDDRRCK--- 361
M++EK+VRKILRSLP RFD KV IEEA DI M+VDEL GSL TFE+ L DR K
Sbjct: 138 RMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSK 197
Query: 362 -------DKKYGNTVKPDFSDSLSNSRFLLDTNVGK---RMDQ----------------- 460
D+ + D + L+N+ LL K RMD+
Sbjct: 198 NLAFVSNDEGEEDEYDLDTDEGLTNAVVLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGS 257
Query: 461 -----------*ATEIQCKGCEGYGHNQIQCPTFSQKK---CNIILSRE-KSKKLKDGVG 595
+ IQC GCEGYGH + +CPT +K+ ++ S + +S++ D
Sbjct: 258 EYQKRSDEKPSHSKGIQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDR 317
Query: 596 KIVAFTAK--ATESDCMIXXXXXXXXXXXXXXXXXXXXXKLLAHCNKLTGLYMKQEKENK 769
+ A T + + E K+L +L + E E +
Sbjct: 318 DVNALTGRFESAEDSSDTDSEITFDELAISYRELCIKSEKILQQEAQLKKVIANLEAEKE 377
Query: 770 RLLDENNEMLIVNSGLNEKVKGLNAELEAMKKSVHMLNSGTSKLDEILSLGQSPNDHTGV 949
DE +E L ++ LN++LE M KS+ MLN G+ LDE+L LG++ + G+
Sbjct: 378 AHEDEISE-------LKGEIGFLNSKLENMTKSIKMLNKGSDLLDEVLQLGKNVGNQRGL 430
Query: 950 GY---VAGECSKESKFVPAAKIKESQLLYQXXXXXXXXXXXXXXRPHIEALPKNKRKKKW 1120
G+ AG + ++FVPA + + H K ++KKW
Sbjct: 431 GFNHKSAGRTTM-TEFVPAKNSTGATMSQHRSR-------------HHGTQQKKSKRKKW 476
Query: 1121 ICHHCGKKGHIRPYCYKLYGRNIH 1192
CH+CGK GHI+P+CY L+G H
Sbjct: 477 RCHYCGKYGHIKPFCYHLHGHPHH 500
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 214 bits (545), Expect = 5e-53
Identities = 156/443 (35%), Positives = 215/443 (48%), Gaps = 49/443 (11%)
Frame = +2
Query: 11 AKEAWETLACVFEGTHKVRVCRLQFLTTKFENLRMKEDETIIEFIIKLKEISNEFYDLGE 190
AK+AWE L EGT KV++ RLQ L TKFENL+MKE+E I +F + + EI+N LGE
Sbjct: 105 AKDAWEILKITHEGTSKVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGE 164
Query: 191 IMSEEKIVRKILRSLPNRFDSKVVVIEEANDISIMKVDELFGSLITFEMSLDDRRCK--- 361
+++EK+VRKILRSLP RFD KV IEEA DI M+VDEL GSL TFE+ L DR K
Sbjct: 165 RITDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSK 224
Query: 362 -------DKKYGNTVKPDFSDSLSNSRFLLDTNVGK---RMDQ----------------- 460
D+ + D + L+N+ LL K RMD+
Sbjct: 225 NLAFVSNDEGEEDEYDLDTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS 284
Query: 461 -----------*ATEIQCKGCEGYGHNQIQCPTF---SQKKCNIILSREKSKKLKDGVGK 598
+ IQC GCEGYGH +CPT +K ++ S +S++ D
Sbjct: 285 KYQKRSDVKPSHSKGIQCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRD 344
Query: 599 IVAFTA--KATESDCMIXXXXXXXXXXXXXXXXXXXXXKLLAHCNKLTGLYMKQEKENKR 772
+ A T + E K+L +L + E E +
Sbjct: 345 VNALTGIFETAEDSSDTDSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEA 404
Query: 773 LLDENNEMLIVNSGLNEKVKGLNAELEAMKKSVHMLNSGTSKLDEILSLGQSPNDHTGVG 952
+E +E L +V LN++LE MKKS+ MLN G+ LDE+L LG++ + G+G
Sbjct: 405 HEEEISE-------LKGEVGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLG 457
Query: 953 Y---VAGECSKESKFVPAAKIKESQLLYQXXXXXXXXXXXXXXRPHIEALPKNKRKKKWI 1123
+ AG + ++FVP AK + + Q H K ++KKW
Sbjct: 458 FNPKFAGRTTM-TEFVP-AKNRTGTTMSQHLSR------------HHGTQQKKSKRKKWR 503
Query: 1124 CHHCGKKGHIRPYCYKLYGRNIH 1192
CH+CGK GHI+P+CY L+G H
Sbjct: 504 CHYCGKYGHIKPFCYHLHGHPHH 526
>ref|NP_001235160.1| gag-protease polyprotein [Glycine max] gi|7488678|pir||T06419
gag-proteinase polyprotein - soybean retrovirus-like
element gi|905361|gb|AAC18777.1| gag-protease polyprotein
[Glycine max]
Length = 640
Score = 212 bits (539), Expect = 2e-52
Identities = 155/444 (34%), Positives = 217/444 (48%), Gaps = 50/444 (11%)
Frame = +2
Query: 11 AKEAWETLACVFEGTHKVRVCRLQFLTTKFENLRMKEDETIIEFIIKLKEISNEFYDLGE 190
AK+AWE L EGT KV++ RLQ L TKFENL+MKE+E I +F + + EI+N LGE
Sbjct: 105 AKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGE 164
Query: 191 IMSEEKIVRKILRSLPNRFDSKVVVIEEANDISIMKVDELFGSLITFEMSLDDRRCK--- 361
M++EK+VRKILRSLP RFD KV IEEA DI ++VDEL GSL TFE+ L DR K
Sbjct: 165 RMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNLRVDELIGSLQTFELGLSDRTEKKSK 224
Query: 362 -------DKKYGNTVKPDFSDSLSNSRFLLDTNVGK---RMDQ----------------- 460
D+ + D + L+N+ LL K RMD+
Sbjct: 225 NLAFVSNDEGEEDEYDLDTDEGLTNAVVLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGS 284
Query: 461 -----------*ATEIQCKGCEGYGHNQIQCPTFSQKK---CNIILSRE-KSKKLKDGVG 595
+ QC GCEGYGH + +CPT +K+ ++ S + +S++ D
Sbjct: 285 EYQKRSDEKPSHSKGFQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDR 344
Query: 596 KIVAFTAK--ATESDCMIXXXXXXXXXXXXXXXXXXXXXKLLAHCNKLTGLYMKQEKENK 769
+ A T + + E K+L +L + E E +
Sbjct: 345 DVNALTGRFESAEDSSDTDSEITFDELATSYRELCIKSEKILQQEAQLKKVIANLEAEKE 404
Query: 770 RLLDENNEMLIVNSGLNEKVKGLNAELEAMKKSVHMLNSGTSKLDEILSLGQSPNDHTGV 949
+E +E L +V LN++LE M KS+ MLN G+ LDE+L LG++ + G+
Sbjct: 405 AHEEEISE-------LKGEVGFLNSKLENMTKSIKMLNKGSDMLDEVLQLGKNVGNQRGL 457
Query: 950 GY---VAGECSKESKFVPAAKIKESQLLYQXXXXXXXXXXXXXXRPHIEALPKNKRKKKW 1120
G+ AG + ++FVP AKI + Q H K ++KKW
Sbjct: 458 GFNHKSAGRITM-TEFVP-AKISTGATMSQHRSR------------HHGTQQKKSKRKKW 503
Query: 1121 ICHHCGKKGHIRPYCYKLYGRNIH 1192
CH+CGK GHI+P+CY L+G H
Sbjct: 504 RCHYCGKYGHIKPFCYHLHGHPHH 527
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 209 bits (532), Expect = 2e-51
Identities = 152/444 (34%), Positives = 214/444 (48%), Gaps = 50/444 (11%)
Frame = +2
Query: 11 AKEAWETLACVFEGTHKVRVCRLQFLTTKFENLRMKEDETIIEFIIKLKEISNEFYDLGE 190
AK+AWE L EGT KV++ RLQ L TKFENL+MKE+E I +F + + EI+N LGE
Sbjct: 105 AKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGE 164
Query: 191 IMSEEKIVRKILRSLPNRFDSKVVVIEEANDISIMKVDELFGSLITFEMSLDDRRCK--- 361
M++EK+VRKILRSLP RFD KV IEEA DI M+VDEL GSL TFE+ L DR K
Sbjct: 165 RMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSK 224
Query: 362 -------DKKYGNTVKPDFSDSLSNSRFLLDTNVGK---RMDQ----------------- 460
D+ + D + L+N+ L K RMD+
Sbjct: 225 NLAFVSNDEGEEDEYDLDTDEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGS 284
Query: 461 -----------*ATEIQCKGCEGYGHNQIQCPTFSQKK---CNIILSRE-KSKKLKDGVG 595
+ IQC+GCEGYGH + +CPT +K+ ++ S + +S++ D
Sbjct: 285 EYQRKSDEKPSHSKGIQCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDR 344
Query: 596 KIVAFTAK--ATESDCMIXXXXXXXXXXXXXXXXXXXXXKLLAHCNKLTGLYMKQEKENK 769
+ A T + + E K+L +L + E E +
Sbjct: 345 DVNALTGRFESAEDSSDTDSEITFDELAIFYRELCIKSEKILQQEAQLKKVIANLEAEKE 404
Query: 770 RLLDENNEMLIVNSGLNEKVKGLNAELEAMKKSVHMLNSGTSKLDEILSLGQSPNDHTGV 949
+E S L +V LN++LE M KS+ MLN G+ LD++L LG+ + G+
Sbjct: 405 AHEEE-------ISKLKGEVGFLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGL 457
Query: 950 GY---VAGECSKESKFVPAAKIKESQLLYQXXXXXXXXXXXXXXRPHIEALPKNKRKKKW 1120
G+ AG + ++FVPA + + H K ++KKW
Sbjct: 458 GFNHKSAGRTTM-TEFVPAKNSTGATMSQHRSR-------------HHGTQQKRSKRKKW 503
Query: 1121 ICHHCGKKGHIRPYCYKLYGRNIH 1192
CH+CGK GHI+P+CY L+G H
Sbjct: 504 RCHYCGKYGHIKPFCYHLHGHPHH 527
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 208 bits (530), Expect = 3e-51
Identities = 152/437 (34%), Positives = 209/437 (47%), Gaps = 48/437 (10%)
Frame = +2
Query: 11 AKEAWETLACVFEGTHKVRVCRLQFLTTKFENLRMKEDETIIEFIIKLKEISNEFYDLGE 190
AK+AWE L EGT KV++ RLQ L TKFENL+MKE+E I +F + + EI+N LGE
Sbjct: 105 AKDAWEILKITHEGTSKVKISRLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGE 164
Query: 191 IMSEEKIVRKILRSLPNRFDSKVVVIEEANDISIMKVDELFGSLITFEMSLDDRRCKDKK 370
+++EK+VRKILRSLP RFD KV IEEA DI M+VDEL GSL TFE+ L DR K K
Sbjct: 165 RITDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSK 224
Query: 371 YGNTVKPD----------FSDSLSNSRFLLDTNVGK---RMDQ----------------- 460
V D + L+N+ LL K RMD+
Sbjct: 225 NLAFVSNDEGEEDEYDLNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS 284
Query: 461 -----------*ATEIQCKGCEGYGHNQIQCPTF---SQKKCNIILSREKSKKLKDGVGK 598
+ IQC GCEGYGH +CPT +K ++ S +S++ D
Sbjct: 285 KYQKKSDVKPSHSKGIQCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRD 344
Query: 599 IVAFTA--KATESDCMIXXXXXXXXXXXXXXXXXXXXXKLLAHCNKLTGLYMKQEKENKR 772
+ A T + E K+L +L + E E +
Sbjct: 345 VNALTGIFETAEDSSDTDSEITFDELATSYRKLCIKSEKILQQEAQLKKVIADLEAEKEA 404
Query: 773 LLDENNEMLIVNSGLNEKVKGLNAELEAMKKSVHMLNSGTSKLDEILSLGQSPNDHTGVG 952
+E +E L +V LN++LE M KS+ MLN G+ LDE+L LG++ + G+G
Sbjct: 405 HKEEISE-------LKGEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLG 457
Query: 953 YVAGECSKE--SKFVPAAKIKESQLLYQXXXXXXXXXXXXXXRPHIEALPKNKRKKKWIC 1126
+ + ++FVP AK + + Q H K ++KKW C
Sbjct: 458 FNPKSAGRTTMTEFVP-AKNRTGATMSQHRSR------------HHGMQQKKSKRKKWRC 504
Query: 1127 HHCGKKGHIRPYCYKLY 1177
H+CGK GHI+P+CY L+
Sbjct: 505 HYCGKYGHIKPFCYHLH 521