BLASTX nr result

ID: Lithospermum22_contig00026676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026676
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofacto...   100   2e-19
gb|EEC74240.1| hypothetical protein OsI_09440 [Oryza sativa Indi...   100   2e-19
ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thali...   100   2e-19
ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...    99   4e-19
ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycin...    98   6e-19

>pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofactor A From
           Arabidopsis Thaliana
          Length = 116

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +3

Query: 57  MTTMRNLKIKTSTCKRIVKEIHSYEKEVEREAAKTSDMKAKGSDPYDLKQQEN 215
           M T+RNLKIKTSTCKRIVKE+HSYEKEVEREAAKT+DMK KG+DPYDLKQQEN
Sbjct: 4   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQEN 56


>gb|EEC74240.1| hypothetical protein OsI_09440 [Oryza sativa Indica Group]
          Length = 227

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 8/72 (11%)
 Frame = +3

Query: 24  ITTPTPLE--------LTKMTTMRNLKIKTSTCKRIVKEIHSYEKEVEREAAKTSDMKAK 179
           ++ PTP E        +++M T+RNLKIKTSTCKRIVKE+ SYEKEVE+EAAKT+DMK K
Sbjct: 97  LSFPTPREHPVSSFFWISRMATLRNLKIKTSTCKRIVKELRSYEKEVEKEAAKTADMKEK 156

Query: 180 GSDPYDLKQQEN 215
           G+DPYDLKQQEN
Sbjct: 157 GADPYDLKQQEN 168


>ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thaliana]
           gi|334184582|ref|NP_001189640.1| tubulin-specific
           chaperone A [Arabidopsis thaliana]
           gi|21542453|sp|O04350.2|TBCA_ARATH RecName:
           Full=Tubulin-specific chaperone A; AltName:
           Full=TCP1-chaperonin cofactor A; AltName:
           Full=Tubulin-folding cofactor A; Short=CFA
           gi|20514257|gb|AAM22957.1|AF486848_1 tubulin folding
           cofactor A [Arabidopsis thaliana]
           gi|15293037|gb|AAK93629.1| putative TCP1-chaperonin
           cofactor A isolog [Arabidopsis thaliana]
           gi|20196887|gb|AAM14821.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana] gi|20198325|gb|AAB63093.2|
           TCP1-chaperonin cofactor A isolog [Arabidopsis thaliana]
           gi|20259135|gb|AAM14283.1| putative TCP1-chaperonin
           cofactor A protein [Arabidopsis thaliana]
           gi|21553949|gb|AAM63030.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana]
           gi|330253289|gb|AEC08383.1| tubulin-specific chaperone A
           [Arabidopsis thaliana] gi|330253290|gb|AEC08384.1|
           tubulin-specific chaperone A [Arabidopsis thaliana]
          Length = 113

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +3

Query: 57  MTTMRNLKIKTSTCKRIVKEIHSYEKEVEREAAKTSDMKAKGSDPYDLKQQEN 215
           M T+RNLKIKTSTCKRIVKE+HSYEKEVEREAAKT+DMK KG+DPYDLKQQEN
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQEN 53


>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +3

Query: 57  MTTMRNLKIKTSTCKRIVKEIHSYEKEVEREAAKTSDMKAKGSDPYDLKQQEN 215
           M T+RNLKIKTSTCKRI+KE HSYEKEVEREAAKT+DMK KG+DPYDLKQQEN
Sbjct: 1   MATIRNLKIKTSTCKRIIKEFHSYEKEVEREAAKTADMKEKGADPYDLKQQEN 53


>ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycine max]
           gi|255629728|gb|ACU15213.1| unknown [Glycine max]
          Length = 114

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = +3

Query: 60  TTMRNLKIKTSTCKRIVKEIHSYEKEVEREAAKTSDMKAKGSDPYDLKQQEN 215
           TT+R+LKIKTSTCKRIVKE+HSYEKEVEREAAKT+DMK KG+DPYDLKQQEN
Sbjct: 3   TTVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQEN 54


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