BLASTX nr result

ID: Lithospermum22_contig00026565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026565
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050644.1| Os03g0608600 [Oryza sativa Japonica Group] g...    57   9e-06

>ref|NP_001050644.1| Os03g0608600 [Oryza sativa Japonica Group]
           gi|40786612|gb|AAR89887.1| putative protease [Oryza
           sativa Japonica Group] gi|108709759|gb|ABF97554.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113549115|dbj|BAF12558.1| Os03g0608600 [Oryza sativa
           Japonica Group] gi|125587087|gb|EAZ27751.1| hypothetical
           protein OsJ_11698 [Oryza sativa Japonica Group]
           gi|215704216|dbj|BAG93056.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 271

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 15/261 (5%)
 Frame = -1

Query: 808 SMSSELQNEFYQKMKSAVWRLEADVDGI*SIYSSSTGFCVDPTGILLCTHHGVTQKVGDK 629
           S+  + + + Y ++KSAVW +  + D       + TGFC+D  G+++   H V+ K    
Sbjct: 9   SIHGQDEQKLYDELKSAVWVIHVESD---ESSGTGTGFCIDQRGLIMTCAHCVSGKT--- 62

Query: 628 YIESDSVDAIQDGKKVNCEIIL-LWKQFDTAVLRLKAKDLDRFDYVSFVDDHFSRNLPSG 452
                   A Q+ KK     +L   + +D A+L       D +  VS  +D     L  G
Sbjct: 63  -----CFVARQNDKKFQKAYVLHKIESWDIAILCFVPNGSDAYPAVSLAND---GTLVPG 114

Query: 451 MELFSIGCCASKSLQFLRGTLTY--------------TFEKDETDYTSLVDNEEYIFDVK 314
            ++++I    S    F  G ++Y              +F K+ TD+     +E       
Sbjct: 115 QDVYAISNQHSLMYSFCSGKVSYPCSDTVRTFDRTPRSFGKEPTDHIPSETSE------- 167

Query: 313 NSGLYKNSSCRTVAELMPYNEYLHPHLNLIEFQYTGLTDSGGQ*GAPLFNSKGRLIGMHS 134
               Y+    +  +  +P+NE     L +IE +   L   G   G P+F   G+++GM S
Sbjct: 168 ----YRTQ--KETSFTLPFNE----DLPIIEMRNIHLGHGGS--GGPIFLHIGKVVGMMS 215

Query: 133 SRIGGLVYGVPLPALKAVIDD 71
           S      Y V + AL+   ++
Sbjct: 216 SGDFSKSYAVHVSALRIAFEE 236


Top