BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026554
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   243   2e-62
emb|CBI18516.3| unnamed protein product [Vitis vinifera]              243   2e-62
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]   243   2e-62
ref|XP_002864412.1| pentatricopeptide repeat-containing protein ...   242   5e-62
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...   240   1e-61

>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  243 bits (620), Expect = 2e-62
 Identities = 110/192 (57%), Positives = 144/192 (75%)
 Frame = -3

Query: 580  DFTNTKISNNSLTNGEEMERSVYTLLTIDRWESLNHMDYKMAKLRPIHGRLALKFLHWVI 401
            D   ++  N + T+G ++E S+YT+LTIDRWESLNHM Y + +LRP+HGRLALKFL WVI
Sbjct: 793  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 852

Query: 400  KQPGLQQSHIIQMYCITTHILFRARMYDPTKSLLKHLSDMVIGVNSVFNALMDTYRVCKS 221
            KQPGL+  H+  MYC+T HIL +ARMYD  KS+L+HL  M IG  S+F ALMDTY +C S
Sbjct: 853  KQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNS 912

Query: 220  NPGIFDLLLRVYIKDYKVTDALDTFRLMGFRGFRPSVYTCNMILAAMAKGHDAESAWSFF 41
             P +FDLL+RVY+K+  +  A++TF L+G  GF+PSVYTCNMILA+M K    E  WS F
Sbjct: 913  IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 972

Query: 40   KEMLERNVCPDV 5
            +EM ++ +CP+V
Sbjct: 973  REMSDKGICPNV 984


>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  243 bits (620), Expect = 2e-62
 Identities = 110/192 (57%), Positives = 144/192 (75%)
 Frame = -3

Query: 580 DFTNTKISNNSLTNGEEMERSVYTLLTIDRWESLNHMDYKMAKLRPIHGRLALKFLHWVI 401
           D   ++  N + T+G ++E S+YT+LTIDRWESLNHM Y + +LRP+HGRLALKFL WVI
Sbjct: 42  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 101

Query: 400 KQPGLQQSHIIQMYCITTHILFRARMYDPTKSLLKHLSDMVIGVNSVFNALMDTYRVCKS 221
           KQPGL+  H+  MYC+T HIL +ARMYD  KS+L+HL  M IG  S+F ALMDTY +C S
Sbjct: 102 KQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNS 161

Query: 220 NPGIFDLLLRVYIKDYKVTDALDTFRLMGFRGFRPSVYTCNMILAAMAKGHDAESAWSFF 41
            P +FDLL+RVY+K+  +  A++TF L+G  GF+PSVYTCNMILA+M K    E  WS F
Sbjct: 162 IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 221

Query: 40  KEMLERNVCPDV 5
           +EM ++ +CP+V
Sbjct: 222 REMSDKGICPNV 233


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  243 bits (620), Expect = 2e-62
 Identities = 110/192 (57%), Positives = 144/192 (75%)
 Frame = -3

Query: 580 DFTNTKISNNSLTNGEEMERSVYTLLTIDRWESLNHMDYKMAKLRPIHGRLALKFLHWVI 401
           D   ++  N + T+G ++E S+YT+LTIDRWESLNHM Y + +LRP+HGRLALKFL WVI
Sbjct: 42  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 101

Query: 400 KQPGLQQSHIIQMYCITTHILFRARMYDPTKSLLKHLSDMVIGVNSVFNALMDTYRVCKS 221
           KQPGL+  H+  MYC+T HIL +ARMYD  KS+L+HL  M IG  S+F ALMDTY +C S
Sbjct: 102 KQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNS 161

Query: 220 NPGIFDLLLRVYIKDYKVTDALDTFRLMGFRGFRPSVYTCNMILAAMAKGHDAESAWSFF 41
            P +FDLL+RVY+K+  +  A++TF L+G  GF+PSVYTCNMILA+M K    E  WS F
Sbjct: 162 IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 221

Query: 40  KEMLERNVCPDV 5
           +EM ++ +CP+V
Sbjct: 222 REMSDKGICPNV 233


>ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310247|gb|EFH40671.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1245

 Score =  242 bits (617), Expect = 5e-62
 Identities = 109/178 (61%), Positives = 139/178 (78%)
 Frame = -3

Query: 538 GEEMERSVYTLLTIDRWESLNHMDYKMAKLRPIHGRLALKFLHWVIKQPGLQQSHIIQMY 359
           G +ME+S+Y +LTIDRW SLNHMDY+ A+LRP+HG+LALKFL WV+KQPGL   HI+Q++
Sbjct: 16  GFDMEKSIYNILTIDRWGSLNHMDYRQARLRPVHGKLALKFLKWVVKQPGLDTDHIVQLF 75

Query: 358 CITTHILFRARMYDPTKSLLKHLSDMVIGVNSVFNALMDTYRVCKSNPGIFDLLLRVYIK 179
           CITTHIL RARMYDP + +LK LS M    + VF ALM TYR+C SNP +FD+L+RVY++
Sbjct: 76  CITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMATYRLCNSNPSVFDILIRVYLR 135

Query: 178 DYKVTDALDTFRLMGFRGFRPSVYTCNMILAAMAKGHDAESAWSFFKEMLERNVCPDV 5
           +  + D+L+ FRLMG  GF PSVYTCN IL ++ K  +  S WSF KEML+R +CPDV
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDV 193


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score =  240 bits (613), Expect = 1e-61
 Identities = 111/168 (66%), Positives = 134/168 (79%)
 Frame = -3

Query: 508 LLTIDRWESLNHMDYKMAKLRPIHGRLALKFLHWVIKQPGLQQSHIIQMYCITTHILFRA 329
           +LTIDRWESLNHM+YK+A LRP+HGRLALKFL+WVI+QPGL+  H+  M  ITTHIL RA
Sbjct: 1   MLTIDRWESLNHMEYKLASLRPVHGRLALKFLNWVIQQPGLELRHLTHMLSITTHILVRA 60

Query: 328 RMYDPTKSLLKHLSDMVIGVNSVFNALMDTYRVCKSNPGIFDLLLRVYIKDYKVTDALDT 149
           R+Y+  KS+LKHLS M +G  SVF ALM+TY +CKSNP +FDLL+RVY+++  V DAL+T
Sbjct: 61  RLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALET 120

Query: 148 FRLMGFRGFRPSVYTCNMILAAMAKGHDAESAWSFFKEMLERNVCPDV 5
           FRLMG RGF PSVYTCNM+L  + K     + W FFKEML R VCPDV
Sbjct: 121 FRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDV 168