BLASTX nr result

ID: Lithospermum22_contig00026490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026490
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
emb|CBI26285.3| unnamed protein product [Vitis vinifera]              212   4e-53
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   209   4e-52
ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   205   5e-51
ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   202   3e-50

>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  214 bits (544), Expect = 1e-53
 Identities = 108/169 (63%), Positives = 127/169 (75%), Gaps = 8/169 (4%)
 Frame = +3

Query: 153 MVALLLRRRISASSVSSTLVNDKVELCHLPWKLRLGSLFGYCSISRP--------AANID 308
           M A LLR R  ++   S ++ DK++      + RLG+L G C++ R         A   D
Sbjct: 1   MAAFLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFD 60

Query: 309 FTDLTCPHTWYPSARRKKRNVYLHVGPTNSGKTYNALKRLESCSSGIYCGPLRLLAWEVA 488
           F DLTCPH WYP ARRK R ++LHVGPTNSGKTY+ALK+LES  SG+YCGPLRLLAWEVA
Sbjct: 61  FLDLTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLESSPSGVYCGPLRLLAWEVA 120

Query: 489 KRLNKAKVPCDLITGQERETVDGAQHKSVTVEMADVTSDYKCAVVDEIQ 635
           KRLNKA VPCDLITGQERE V+GA+HK+VTVEMADVTS+Y CAVVDEIQ
Sbjct: 121 KRLNKANVPCDLITGQEREEVNGAKHKAVTVEMADVTSNYSCAVVDEIQ 169


>emb|CBI26285.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  212 bits (540), Expect = 4e-53
 Identities = 108/165 (65%), Positives = 126/165 (76%), Gaps = 6/165 (3%)
 Frame = +3

Query: 159 ALLLRRRISASSVSSTLVNDKVELCHLPWKLRLGSLFGYC------SISRPAANIDFTDL 320
           + LLRR +S S +S T  +  +E  H   +LR   L G C      S S   + +DF DL
Sbjct: 4   SFLLRRHLSFSGISPTF-HGTMEPFHRHLELRFRILVGVCNRIRQFSSSSSTSKLDFMDL 62

Query: 321 TCPHTWYPSARRKKRNVYLHVGPTNSGKTYNALKRLESCSSGIYCGPLRLLAWEVAKRLN 500
           T PHTWYP+ARRK R V +HVGPTNSGKT++ALKRLES SSGIYCGPLRLLAWEVAKRLN
Sbjct: 63  THPHTWYPNARRKSRKVIMHVGPTNSGKTHHALKRLESSSSGIYCGPLRLLAWEVAKRLN 122

Query: 501 KAKVPCDLITGQERETVDGAQHKSVTVEMADVTSDYKCAVVDEIQ 635
           KA VPCD+ITGQERE +DGA+HK++TVEMADVTSDY CAV+DEIQ
Sbjct: 123 KANVPCDMITGQEREEIDGAKHKAMTVEMADVTSDYHCAVIDEIQ 167


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score =  209 bits (531), Expect = 4e-52
 Identities = 108/170 (63%), Positives = 128/170 (75%), Gaps = 9/170 (5%)
 Frame = +3

Query: 153 MVALLLR---RRISASSVSSTLVNDKVELCHLPWKLRLGSLFGYCSISR------PAANI 305
           M +LLLR   R++S+  +S  L  +  E   L  + + G+LF   +++R          I
Sbjct: 1   MASLLLRLRQRKVSSLGISRLLNAENGEPFQLHAEFKFGALFSVHTLTRLYRSDNGKPKI 60

Query: 306 DFTDLTCPHTWYPSARRKKRNVYLHVGPTNSGKTYNALKRLESCSSGIYCGPLRLLAWEV 485
           DFTDLTCPH+WYPSAR+K R V LHVGPTNSGKT++ALKRL S  SGIYCGPLRLLAWEV
Sbjct: 61  DFTDLTCPHSWYPSARKKHRKVTLHVGPTNSGKTHHALKRLASSPSGIYCGPLRLLAWEV 120

Query: 486 AKRLNKAKVPCDLITGQERETVDGAQHKSVTVEMADVTSDYKCAVVDEIQ 635
           A +LNK +VPCDLITGQERE VDGA+HK+VTVEMADVTSDY CAVVDEIQ
Sbjct: 121 ANKLNKGQVPCDLITGQEREEVDGAKHKAVTVEMADVTSDYSCAVVDEIQ 170


>ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Cucumis sativus] gi|449504169|ref|XP_004162271.1|
           PREDICTED: ATP-dependent RNA helicase SUPV3L1,
           mitochondrial-like [Cucumis sativus]
          Length = 560

 Score =  205 bits (522), Expect = 5e-51
 Identities = 95/119 (79%), Positives = 108/119 (90%)
 Frame = +3

Query: 279 SISRPAANIDFTDLTCPHTWYPSARRKKRNVYLHVGPTNSGKTYNALKRLESCSSGIYCG 458
           SISR  +N DFTDLTCPH+WYP+AR+K R ++LH+GPTNSGKT+NALKRLES  SG+YCG
Sbjct: 40  SISR--SNFDFTDLTCPHSWYPNARKKHRKIFLHMGPTNSGKTHNALKRLESSDSGVYCG 97

Query: 459 PLRLLAWEVAKRLNKAKVPCDLITGQERETVDGAQHKSVTVEMADVTSDYKCAVVDEIQ 635
           PLRLLAWEVAKRLN AK+PCDLITGQERE VDGA+HK+VTVEMADVTS Y CAV+DEIQ
Sbjct: 98  PLRLLAWEVAKRLNNAKIPCDLITGQEREEVDGAKHKAVTVEMADVTSSYSCAVIDEIQ 156


>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Vitis vinifera]
          Length = 572

 Score =  202 bits (515), Expect = 3e-50
 Identities = 100/144 (69%), Positives = 114/144 (79%), Gaps = 6/144 (4%)
 Frame = +3

Query: 222 VELCHLPWKLRLGSLFGYC------SISRPAANIDFTDLTCPHTWYPSARRKKRNVYLHV 383
           +E  H   +LR   L G C      S S   + +DF DLT PHTWYP+ARRK R V +HV
Sbjct: 28  MEPFHRHLELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHV 87

Query: 384 GPTNSGKTYNALKRLESCSSGIYCGPLRLLAWEVAKRLNKAKVPCDLITGQERETVDGAQ 563
           GPTNSGKT++ALKRLES SSGIYCGPLRLLAWEVAKRLNKA VPCD+ITGQERE +DGA+
Sbjct: 88  GPTNSGKTHHALKRLESSSSGIYCGPLRLLAWEVAKRLNKANVPCDMITGQEREEIDGAK 147

Query: 564 HKSVTVEMADVTSDYKCAVVDEIQ 635
           HK++TVEMADVTSDY CAV+DEIQ
Sbjct: 148 HKAMTVEMADVTSDYHCAVIDEIQ 171


Top