BLASTX nr result
ID: Lithospermum22_contig00026459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00026459
(1429 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi... 338 3e-90
emb|CBI17752.3| unnamed protein product [Vitis vinifera] 338 3e-90
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,... 320 6e-85
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2... 317 4e-84
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi... 305 3e-80
>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 338 bits (866), Expect = 3e-90
Identities = 157/246 (63%), Positives = 205/246 (83%)
Frame = -2
Query: 1425 SYMVRNNERVLMALAVFEELRMKGYCSVQMYNILMDSLYDMNELNRAITLFHELSASELQ 1246
S M+ ER+ +AL VFE L+ KGYCS+ +YNILM++++ E+ +A++LF ++ S +
Sbjct: 978 SVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFK 1037
Query: 1245 PDSLTYSRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMML 1066
PDS TYS AI CF+ VG++QEAC YNKIIE +PS+ AY+SLVKGLC+ +IDAA+ML
Sbjct: 1038 PDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIML 1097
Query: 1065 IRECLANVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMC 886
+R+CLANV +GP+EFKYTLTI+H CKS +A K+I+V+NE+M++GC PD + YSA+ISGMC
Sbjct: 1098 VRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMC 1157
Query: 885 RHGTIEEARKVISSMEERKLLTEAEAIVWDEILVEHMKQKTADLVLSGLKFFGLESKLKA 706
+HGT+EEARKV S+M ERKLLTEA IV+DEIL+EHMK+KTADLVLSGLKFFGLESKL++
Sbjct: 1158 KHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRS 1217
Query: 705 KGSTLL 688
KGSTLL
Sbjct: 1218 KGSTLL 1223
Score = 61.2 bits (147), Expect = 6e-07
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Frame = -2
Query: 1401 RVLMALAVFEELRMKGYCS-VQMYNILMDSLYDMNELNRAITLFHELSASELQPDSLTYS 1225
R L V+E+++ G V +YN +MD L L+ A++++ + L +S+TY
Sbjct: 741 RGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYM 800
Query: 1224 RAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLAN 1045
++ G + E + ++ + P + AY +LV LC ++ L +E
Sbjct: 801 ILVKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQK 860
Query: 1044 --VINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTI 871
+I+ + Y I + +++ +LM+ G D IY+++I GMC +
Sbjct: 861 KYLIDRAI---YGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQV 917
Query: 870 EEARKVISSMEERKLLTEAEAIVWDEILVEHMKQKTAD 757
++A K+ L E + +LV + + K D
Sbjct: 918 DKAYKLFQVTVHESL--EPNFLTVKPMLVSYAEMKRMD 953
>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 338 bits (866), Expect = 3e-90
Identities = 157/246 (63%), Positives = 205/246 (83%)
Frame = -2
Query: 1425 SYMVRNNERVLMALAVFEELRMKGYCSVQMYNILMDSLYDMNELNRAITLFHELSASELQ 1246
S M+ ER+ +AL VFE L+ KGYCS+ +YNILM++++ E+ +A++LF ++ S +
Sbjct: 474 SVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFK 533
Query: 1245 PDSLTYSRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMML 1066
PDS TYS AI CF+ VG++QEAC YNKIIE +PS+ AY+SLVKGLC+ +IDAA+ML
Sbjct: 534 PDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIML 593
Query: 1065 IRECLANVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMC 886
+R+CLANV +GP+EFKYTLTI+H CKS +A K+I+V+NE+M++GC PD + YSA+ISGMC
Sbjct: 594 VRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMC 653
Query: 885 RHGTIEEARKVISSMEERKLLTEAEAIVWDEILVEHMKQKTADLVLSGLKFFGLESKLKA 706
+HGT+EEARKV S+M ERKLLTEA IV+DEIL+EHMK+KTADLVLSGLKFFGLESKL++
Sbjct: 654 KHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRS 713
Query: 705 KGSTLL 688
KGSTLL
Sbjct: 714 KGSTLL 719
Score = 65.9 bits (159), Expect = 3e-08
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Frame = -2
Query: 1425 SYMVRNNERVLMALAVFEELRMKGYC-SVQMYNILMDSLYDMNELNRAITLFHELSASEL 1249
+Y + + + A V E + M+G S + + IL+ D N R ++ ++ +
Sbjct: 159 AYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGI 218
Query: 1248 QPDSLTYSRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMM 1069
+P Y+R + + G++ A Y E + Y LVKGLC+ +ID +
Sbjct: 219 KPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLE 278
Query: 1068 LIRECLANVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGM 889
L+ N+ P F YT + + + + V E+ + EPD + Y+ +++ +
Sbjct: 279 LLDRMRGNLCK-PDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAAL 337
Query: 888 CRHGTIEEARKVISSMEERKLLTE 817
C + E ++ M+++K L +
Sbjct: 338 CNGNRVGEGFELFKEMKQKKYLID 361
Score = 60.5 bits (145), Expect = 1e-06
Identities = 44/215 (20%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Frame = -2
Query: 1392 MALAVFEELRMKGYCSVQM-YNILMDSLYDMNELNRAITLFHELSASELQPDSLTYSRAI 1216
+A++V+E+ + G + Y IL+ L ++ + L + + +PD Y+ +
Sbjct: 240 LAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMV 299
Query: 1215 QCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLAN--V 1042
+ + GN+ + ++ + P + AY +LV LC ++ L +E +
Sbjct: 300 KVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYL 359
Query: 1041 INGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIEEA 862
I+ + Y I + +++ +LM+ G D IY+++I GMC +++A
Sbjct: 360 IDRAI---YGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKA 416
Query: 861 RKVISSMEERKLLTEAEAIVWDEILVEHMKQKTAD 757
K+ L E + +LV + + K D
Sbjct: 417 YKLFQVTVHESL--EPNFLTVKPMLVSYAEMKRMD 449
>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1128
Score = 320 bits (820), Expect = 6e-85
Identities = 151/248 (60%), Positives = 202/248 (81%)
Frame = -2
Query: 1425 SYMVRNNERVLMALAVFEELRMKGYCSVQMYNILMDSLYDMNELNRAITLFHELSASELQ 1246
S++VR E + +AL VFEEL++KGY SV +YN LM++L + E+ +A++LF E+ +
Sbjct: 881 SFLVRREEIITLALEVFEELKVKGYISVLIYNTLMEALLKVGEVRKALSLFSEMKDLNCE 940
Query: 1245 PDSLTYSRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMML 1066
PDS TYS A+ CF+ GN+QEAC+ +NKIIE S +PS+ AY SL KGLC+I +ID AMML
Sbjct: 941 PDSNTYSIAVICFVEDGNIQEACVCHNKIIEMSSVPSVAAYCSLTKGLCDIGEIDEAMML 1000
Query: 1065 IRECLANVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMC 886
+R+CL NV +GP+EFKYTLT++HVC+S DA K+IEV+NE+M + C P+ +I SAIISGMC
Sbjct: 1001 VRDCLGNVTSGPMEFKYTLTVLHVCRSGDAEKVIEVLNEMMHENCPPNEVILSAIISGMC 1060
Query: 885 RHGTIEEARKVISSMEERKLLTEAEAIVWDEILVEHMKQKTADLVLSGLKFFGLESKLKA 706
+HGT+EEARKV +++ ERKLLTEA+ I +DE L+EHMK+KTADLV+SGLKFFGLESKL+A
Sbjct: 1061 KHGTLEEARKVFTNLRERKLLTEAKTIFYDERLIEHMKKKTADLVVSGLKFFGLESKLRA 1120
Query: 705 KGSTLLAS 682
KG TLL++
Sbjct: 1121 KGCTLLST 1128
Score = 65.9 bits (159), Expect = 3e-08
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Frame = -2
Query: 1338 MYNILMDSLYDMNELNRAITLFHELSASELQPDSLTYSRAIQCFIGVGNMQEACLYYNKI 1159
+YN +MD+L L+ A+ ++ + + L DS+TY I+ G + E + ++
Sbjct: 666 LYNRIMDALIKTAHLDLALVVYDDFKSDGLVEDSVTYMILIKGLCKFGRIDEMMEVWEEM 725
Query: 1158 IETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLAN--VINGPLEFKYTLTIIHVCKS 985
P + AY ++V GLC+ ++ L +E N +I+ + Y + I K
Sbjct: 726 KRDGVNPDVMAYATVVTGLCKGGRVAEGYELFKEMKENKVLIDRAI---YGVLIEAFVKD 782
Query: 984 NDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIEEARKVISSMEERKLLTEAEAI 805
+++ L++ G D IY+++I G+C +++ARK+ M + L + + +
Sbjct: 783 GKIGSACDLLQGLVDSGYRADLGIYNSLIEGLCNVKRVDKARKLFQIMVQEGLELDFKTV 842
Query: 804 VWDEILVEHMKQKTAD 757
+ +LV + + K D
Sbjct: 843 --NPMLVSYAEMKRMD 856
>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
predicted protein [Populus trichocarpa]
Length = 728
Score = 317 bits (813), Expect = 4e-84
Identities = 154/248 (62%), Positives = 203/248 (81%)
Frame = -2
Query: 1425 SYMVRNNERVLMALAVFEELRMKGYCSVQMYNILMDSLYDMNELNRAITLFHELSASELQ 1246
SY+V ER +MAL VFE+L++KGY SV +YNILM++L + E+ RA++LF E+ +
Sbjct: 482 SYVVGKPERTMMALEVFEDLKVKGYSSVPIYNILMEALLTIGEMKRALSLFGEMKDLN-K 540
Query: 1245 PDSLTYSRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMML 1066
PDS TYS AI CF+ GN+QEAC+ +NKI+E +PS+ AY SL KGLC+ +IDAAMML
Sbjct: 541 PDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEIDAAMML 600
Query: 1065 IRECLANVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMC 886
+R+CLA+V +GP+EFKY+LTI+H CK+ A K+I+V+NE+M++GC P+ +IYSAIISGMC
Sbjct: 601 VRDCLASVESGPMEFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAIISGMC 660
Query: 885 RHGTIEEARKVISSMEERKLLTEAEAIVWDEILVEHMKQKTADLVLSGLKFFGLESKLKA 706
+HGT EEARKV + + +RK+LTEA+ IV+DEIL+EHMK+KTADLVL+GLKFFGLESKLKA
Sbjct: 661 KHGTFEEARKVFTDLRQRKILTEAKTIVFDEILIEHMKKKTADLVLAGLKFFGLESKLKA 720
Query: 705 KGSTLLAS 682
GSTLL S
Sbjct: 721 MGSTLLGS 728
Score = 65.1 bits (157), Expect = 4e-08
Identities = 38/175 (21%), Positives = 78/175 (44%)
Frame = -2
Query: 1341 QMYNILMDSLYDMNELNRAITLFHELSASELQPDSLTYSRAIQCFIGVGNMQEACLYYNK 1162
+ + IL+ D N R ++ ++ ++P Y+R + I G++ A Y
Sbjct: 196 KQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYED 255
Query: 1161 IIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLANVINGPLEFKYTLTIIHVCKSN 982
+ Y L+KGLC+ +I+ M ++ N+ P F YT + +
Sbjct: 256 FRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCK-PDVFAYTAMVRALAGEG 314
Query: 981 DAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIEEARKVISSMEERKLLTE 817
+ + V E+ G EPD + Y +++ +C+ G +++ +V M+ R++L +
Sbjct: 315 NLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILID 369
Score = 57.8 bits (138), Expect = 7e-06
Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 1/213 (0%)
Frame = -2
Query: 1392 MALAVFEELRMKGYCSVQM-YNILMDSLYDMNELNRAITLFHELSASELQPDSLTYSRAI 1216
+AL+V+E+ R G + Y IL+ L + + + + + +PD Y+ +
Sbjct: 248 LALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMV 307
Query: 1215 QCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLANVIN 1036
+ G GN+ + ++ P + AY +LV LC+ ++D + +E I
Sbjct: 308 RALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRIL 367
Query: 1035 GPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIEEARK 856
Y + + +++ +L++ G D IY+++I G C +++A K
Sbjct: 368 IDRGI-YGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKAHK 426
Query: 855 VISSMEERKLLTEAEAIVWDEILVEHMKQKTAD 757
+ + L + + + + +L+ + + K D
Sbjct: 427 LFQVTVQEGLERDFKTV--NPLLMSYAEMKKMD 457
>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Glycine max]
Length = 733
Score = 305 bits (780), Expect = 3e-80
Identities = 145/238 (60%), Positives = 190/238 (79%)
Frame = -2
Query: 1395 LMALAVFEELRMKGYCSVQMYNILMDSLYDMNELNRAITLFHELSASELQPDSLTYSRAI 1216
+MAL F +L+ KG+ SV++YNI MDSL+ + E+ +A++LF E+ L+PDS TY AI
Sbjct: 496 IMALETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAI 555
Query: 1215 QCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLANVIN 1036
C + +G ++EAC +N+IIE S IPS+ AY SL KGLC+I +ID AM+L+R+CL NV +
Sbjct: 556 LCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSD 615
Query: 1035 GPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIEEARK 856
GPLEFKY+LTIIH CKSN A K+I+V+NE++EQGC D++IY +IISGMC+HGTIEEARK
Sbjct: 616 GPLEFKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARK 675
Query: 855 VISSMEERKLLTEAEAIVWDEILVEHMKQKTADLVLSGLKFFGLESKLKAKGSTLLAS 682
V S++ ER LTE+ IV+DE+L++HMK+KTADLVLS LKFFGLESKLKAKG LL S
Sbjct: 676 VFSNLRERNFLTESNTIVYDELLIDHMKKKTADLVLSSLKFFGLESKLKAKGCKLLPS 733
Score = 62.4 bits (150), Expect = 3e-07
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Frame = -2
Query: 1401 RVLMALAVFEELRMKGYCS--VQMYNILMDSLYDMNELNRAITLFHELSASELQPDSLTY 1228
R L V+E++R K V +YN +MD+L L+ A++++ +L L +S+T+
Sbjct: 214 RGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTF 273
Query: 1227 SRAIQCFIGVGNMQEACLYYNKIIETSDIPSIPAYQSLVKGLCEIRQIDAAMMLIRECLA 1048
++ G + E ++ E P + AY +LVK L +DA + + E
Sbjct: 274 MVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKR 333
Query: 1047 NVINGPLEFKYTLTIIHVCKSNDAAKIIEVVNELMEQGCEPDSIIYSAIISGMCRHGTIE 868
+ + ++ Y I+ + K + E+ E+ +GC D +IY A++ G +E
Sbjct: 334 DRVEPDVK-AYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVE 392
Query: 867 EARKVISSM 841
A ++ +
Sbjct: 393 LAFDLLKDL 401