BLASTX nr result

ID: Lithospermum22_contig00026452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026452
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540996.1| PREDICTED: probable nucleolar protein 5-2-li...    68   5e-11
ref|XP_003537858.1| PREDICTED: probable nucleolar protein 5-2-li...    68   5e-11
ref|XP_002328381.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|2...    70   9e-11
dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]                66   3e-10

>ref|XP_003540996.1| PREDICTED: probable nucleolar protein 5-2-like [Glycine max]
          Length = 556

 Score = 68.2 bits (165), Expect(2) = 5e-11
 Identities = 34/43 (79%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131
           LEG  LGR AGSAKGKPKIEAYDKD KKG GGLITPAK  + S
Sbjct: 396 LEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438



 Score = 23.9 bits (50), Expect(2) = 5e-11
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +2

Query: 179 QAYNPSADSTVGW---NELSADKDEP 247
           + YNPSADS +G    + +  D  EP
Sbjct: 433 KTYNPSADSVIGQMVNSAMDEDAQEP 458


>ref|XP_003537858.1| PREDICTED: probable nucleolar protein 5-2-like [Glycine max]
          Length = 551

 Score = 68.2 bits (165), Expect(2) = 5e-11
 Identities = 34/43 (79%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131
           LEG  LGR AGSAKGKPKIEAYDKD KKG GGLITPAK  + S
Sbjct: 396 LEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438



 Score = 23.9 bits (50), Expect(2) = 5e-11
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +2

Query: 179 QAYNPSADSTVGW---NELSADKDEP 247
           + YNPSADS +G    + +  D  EP
Sbjct: 433 KTYNPSADSVIGQMVDSAIDEDAQEP 458


>ref|XP_002328381.1| predicted protein [Populus trichocarpa] gi|222838096|gb|EEE76461.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/39 (89%), Positives = 35/39 (89%)
 Frame = +3

Query: 3   LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKV 119
           LEG  LGRSAGSAKGKPKIEAYDKD KKG GGLITPAKV
Sbjct: 396 LEGKELGRSAGSAKGKPKIEAYDKDRKKGAGGLITPAKV 434


>ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|222857974|gb|EEE95521.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 70.5 bits (171), Expect(2) = 9e-11
 Identities = 35/43 (81%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131
           LEG  LGRSAGSAKGKPKIEAYDKD KKG GGLITPAK  + S
Sbjct: 396 LEGKELGRSAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438



 Score = 20.8 bits (42), Expect(2) = 9e-11
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 179 QAYNPSADSTVG 214
           + YNPSAD+ +G
Sbjct: 433 KTYNPSADAILG 444


>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score = 66.2 bits (160), Expect(2) = 3e-10
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = +3

Query: 3   LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKV 119
           LEG  LG+SAGSAKGKPKIE YDKD KKG G LITPAKV
Sbjct: 396 LEGKELGKSAGSAKGKPKIEVYDKDRKKGAGALITPAKV 434



 Score = 23.1 bits (48), Expect(2) = 3e-10
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 179 QAYNPSADSTVGWNE 223
           + YNP+ADS +G  E
Sbjct: 433 KVYNPAADSVIGHTE 447


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