BLASTX nr result
ID: Lithospermum22_contig00026452
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00026452 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540996.1| PREDICTED: probable nucleolar protein 5-2-li... 68 5e-11 ref|XP_003537858.1| PREDICTED: probable nucleolar protein 5-2-li... 68 5e-11 ref|XP_002328381.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|2... 70 9e-11 dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum] 66 3e-10 >ref|XP_003540996.1| PREDICTED: probable nucleolar protein 5-2-like [Glycine max] Length = 556 Score = 68.2 bits (165), Expect(2) = 5e-11 Identities = 34/43 (79%), Positives = 35/43 (81%) Frame = +3 Query: 3 LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131 LEG LGR AGSAKGKPKIEAYDKD KKG GGLITPAK + S Sbjct: 396 LEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438 Score = 23.9 bits (50), Expect(2) = 5e-11 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = +2 Query: 179 QAYNPSADSTVGW---NELSADKDEP 247 + YNPSADS +G + + D EP Sbjct: 433 KTYNPSADSVIGQMVNSAMDEDAQEP 458 >ref|XP_003537858.1| PREDICTED: probable nucleolar protein 5-2-like [Glycine max] Length = 551 Score = 68.2 bits (165), Expect(2) = 5e-11 Identities = 34/43 (79%), Positives = 35/43 (81%) Frame = +3 Query: 3 LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131 LEG LGR AGSAKGKPKIEAYDKD KKG GGLITPAK + S Sbjct: 396 LEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438 Score = 23.9 bits (50), Expect(2) = 5e-11 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = +2 Query: 179 QAYNPSADSTVGW---NELSADKDEP 247 + YNPSADS +G + + D EP Sbjct: 433 KTYNPSADSVIGQMVDSAIDEDAQEP 458 >ref|XP_002328381.1| predicted protein [Populus trichocarpa] gi|222838096|gb|EEE76461.1| predicted protein [Populus trichocarpa] Length = 438 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/39 (89%), Positives = 35/39 (89%) Frame = +3 Query: 3 LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKV 119 LEG LGRSAGSAKGKPKIEAYDKD KKG GGLITPAKV Sbjct: 396 LEGKELGRSAGSAKGKPKIEAYDKDRKKGAGGLITPAKV 434 >ref|XP_002319598.1| predicted protein [Populus trichocarpa] gi|222857974|gb|EEE95521.1| predicted protein [Populus trichocarpa] Length = 561 Score = 70.5 bits (171), Expect(2) = 9e-11 Identities = 35/43 (81%), Positives = 36/43 (83%) Frame = +3 Query: 3 LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKVCSAS 131 LEG LGRSAGSAKGKPKIEAYDKD KKG GGLITPAK + S Sbjct: 396 LEGKELGRSAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPS 438 Score = 20.8 bits (42), Expect(2) = 9e-11 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +2 Query: 179 QAYNPSADSTVG 214 + YNPSAD+ +G Sbjct: 433 KTYNPSADAILG 444 >dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum] Length = 555 Score = 66.2 bits (160), Expect(2) = 3e-10 Identities = 32/39 (82%), Positives = 33/39 (84%) Frame = +3 Query: 3 LEGVNLGRSAGSAKGKPKIEAYDKDWKKGTGGLITPAKV 119 LEG LG+SAGSAKGKPKIE YDKD KKG G LITPAKV Sbjct: 396 LEGKELGKSAGSAKGKPKIEVYDKDRKKGAGALITPAKV 434 Score = 23.1 bits (48), Expect(2) = 3e-10 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 Query: 179 QAYNPSADSTVGWNE 223 + YNP+ADS +G E Sbjct: 433 KVYNPAADSVIGHTE 447