BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026426
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   484   e-134
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              484   e-134
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   452   e-124
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   448   e-123

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  484 bits (1246), Expect = e-134
 Identities = 241/384 (62%), Positives = 299/384 (77%), Gaps = 4/384 (1%)
 Frame = +3

Query: 3    EFRKLGATVVYASFSKVIIDTGKTDLSAANAYCESVLKTLKSRELFEWIEFEPSQYWNSL 182
            EFRKLGAT+V+A+FSKVIIDTGK+DLSAA AYC+S+LKTL++R+LFEWIE EP  +W+SL
Sbjct: 1831 EFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSL 1890

Query: 183  LFMDLYNYGGIPAKLSIRS--SEDDPLLEDAIMDDESQLEILSFWNIAENLPEPMQEQFN 356
            LFMD YNYGG+ A+    S     DP  E   ++DESQ++I+S WNIAE LP+ +Q+ F 
Sbjct: 1891 LFMDQYNYGGVQARSHGGSLIGSSDPTSES--IEDESQVDIVSSWNIAEQLPKTIQDHFV 1948

Query: 357  SVVAKFIYDPWKYAREEVENRAVSKMGISCTPSITGAAAEAFELRLTENLKKMIKSYLS- 533
             +V++F+Y PWKYARE+  NRA ++ G SCTPSIT AAAE FE  +TE LK+ I SY + 
Sbjct: 1949 LIVSEFMYTPWKYAREQAANRASARNGDSCTPSITAAAAEVFESHITEYLKEQISSYFAD 2008

Query: 534  MLLNIVNNDHRVFKGNDQSSNSQK-GDPSLEFIKHVCAVLSLDQSVQHEVLIMRRNLLKS 710
             LL IV +     KG ++S N Q  GD +LEFIKHVCAVL+LDQ+VQH++L+MR+NLLK 
Sbjct: 2009 KLLRIVRDTVLHMKGMNRSENDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKY 2068

Query: 711  VRVREFAPEAEFQNLSSEFIIPDVICSFCNDRRDLHLGRDRTLLARGWHCTAPLCGQLYD 890
            V VREFAPEAEF +    FI+P+VICS+CND RDL L RD  LLA+ W C  P CGQ YD
Sbjct: 2069 VHVREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYD 2128

Query: 891  HEVMENTLLQIMRQRERLYHLQDLVCMKCNLLKAAHISEHCICAGSFRCREDLSEFRSTM 1070
             EVMEN LLQI+RQRERLYH+QDLVC+KCN +KAAH++E C CAGSFRC+ED+SEF+S M
Sbjct: 2129 REVMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKM 2188

Query: 1071 RLFLDVATNQNFQLLHECCSWILE 1142
            ++FL +A  Q FQLL EC SWILE
Sbjct: 2189 QVFLKIAMLQKFQLLQECTSWILE 2212


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  484 bits (1246), Expect = e-134
 Identities = 241/384 (62%), Positives = 299/384 (77%), Gaps = 4/384 (1%)
 Frame = +3

Query: 3    EFRKLGATVVYASFSKVIIDTGKTDLSAANAYCESVLKTLKSRELFEWIEFEPSQYWNSL 182
            EFRKLGAT+V+A+FSKVIIDTGK+DLSAA AYC+S+LKTL++R+LFEWIE EP  +W+SL
Sbjct: 2340 EFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSL 2399

Query: 183  LFMDLYNYGGIPAKLSIRS--SEDDPLLEDAIMDDESQLEILSFWNIAENLPEPMQEQFN 356
            LFMD YNYGG+ A+    S     DP  E   ++DESQ++I+S WNIAE LP+ +Q+ F 
Sbjct: 2400 LFMDQYNYGGVQARSHGGSLIGSSDPTSES--IEDESQVDIVSSWNIAEQLPKTIQDHFV 2457

Query: 357  SVVAKFIYDPWKYAREEVENRAVSKMGISCTPSITGAAAEAFELRLTENLKKMIKSYLS- 533
             +V++F+Y PWKYARE+  NRA ++ G SCTPSIT AAAE FE  +TE LK+ I SY + 
Sbjct: 2458 LIVSEFMYTPWKYAREQAANRASARNGDSCTPSITAAAAEVFESHITEYLKEQISSYFAD 2517

Query: 534  MLLNIVNNDHRVFKGNDQSSNSQK-GDPSLEFIKHVCAVLSLDQSVQHEVLIMRRNLLKS 710
             LL IV +     KG ++S N Q  GD +LEFIKHVCAVL+LDQ+VQH++L+MR+NLLK 
Sbjct: 2518 KLLRIVRDTVLHMKGMNRSENDQHTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKY 2577

Query: 711  VRVREFAPEAEFQNLSSEFIIPDVICSFCNDRRDLHLGRDRTLLARGWHCTAPLCGQLYD 890
            V VREFAPEAEF +    FI+P+VICS+CND RDL L RD  LLA+ W C  P CGQ YD
Sbjct: 2578 VHVREFAPEAEFCDPCQSFILPNVICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYD 2637

Query: 891  HEVMENTLLQIMRQRERLYHLQDLVCMKCNLLKAAHISEHCICAGSFRCREDLSEFRSTM 1070
             EVMEN LLQI+RQRERLYH+QDLVC+KCN +KAAH++E C CAGSFRC+ED+SEF+S M
Sbjct: 2638 REVMENALLQIVRQRERLYHVQDLVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKM 2697

Query: 1071 RLFLDVATNQNFQLLHECCSWILE 1142
            ++FL +A  Q FQLL EC SWILE
Sbjct: 2698 QVFLKIAMLQKFQLLQECTSWILE 2721


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  457 bits (1176), Expect = e-126
 Identities = 232/395 (58%), Positives = 288/395 (72%), Gaps = 15/395 (3%)
 Frame = +3

Query: 3    EFRKLGATVVYASFSKVIIDTGKTDLSAANAYCESVLKTLKSRELFEWIEFEPSQYWNSL 182
            E RKLGAT+++A+FSKVIIDTGK +L+AA AYC+SVLKTL++RELFEWIE EP Q+W+SL
Sbjct: 1827 ELRKLGATIIFANFSKVIIDTGKFELTAAKAYCDSVLKTLQNRELFEWIELEPLQFWHSL 1886

Query: 183  LFMDLYNYGGIPAKLSIRSSEDDPLLEDAIMDDESQLEILSFWNIAENLPEPMQEQFNSV 362
            LFMD YNYGGIPA+    S  D   L      +E +++I+S WNIAE LP+ +Q+ F  +
Sbjct: 1887 LFMDQYNYGGIPARPDDSSHND---LHHHSPREEPKVDIVSNWNIAEYLPKKIQDHFVLI 1943

Query: 363  VAKFIYDPWKYAREEVENRAVSKMGISCTPSITGAAAEAFELRLTENLKKMIKSYLS-ML 539
            V++F++ PW YA+++   R   + G SCTPSIT  AAE FE  + E +K  I ++ +  L
Sbjct: 1944 VSEFMFIPWDYAQKQAATREALRDGNSCTPSITIVAAENFESHMVEYIKGQIGTHFTDKL 2003

Query: 540  LNIVNNDHRVFKGNDQSSNSQ--------------KGDPSLEFIKHVCAVLSLDQSVQHE 677
            L I  +     KG ++S N Q              KGDP+LEFIKHVCAVL+LDQ VQHE
Sbjct: 2004 LGIARDTVLHMKGINKSENGQQISLGIQQPAGMNHKGDPALEFIKHVCAVLALDQHVQHE 2063

Query: 678  VLIMRRNLLKSVRVREFAPEAEFQNLSSEFIIPDVICSFCNDRRDLHLGRDRTLLARGWH 857
            VL+MR+NLLK VRVREFAPEAEF +    FI+P+VICS+CND RDL L RD  +LA  W 
Sbjct: 2064 VLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSAVLAEEWR 2123

Query: 858  CTAPLCGQLYDHEVMENTLLQIMRQRERLYHLQDLVCMKCNLLKAAHISEHCICAGSFRC 1037
            C  P CGQ YD EVMEN LLQI+RQRERLYHLQDLVC++CN +KAAH+SE C CAGS+RC
Sbjct: 2124 CAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCSCAGSYRC 2183

Query: 1038 REDLSEFRSTMRLFLDVATNQNFQLLHECCSWILE 1142
            RED+SEFR  M++FL+VA  Q FQLL EC SWILE
Sbjct: 2184 REDVSEFRRKMQIFLNVAIRQKFQLLQECTSWILE 2218


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  452 bits (1162), Expect = e-124
 Identities = 229/394 (58%), Positives = 290/394 (73%), Gaps = 14/394 (3%)
 Frame = +3

Query: 3    EFRKLGATVVYASFSKVIIDTGKTDLSAANAYCESVLKTLKSRELFEWIEFEPSQYWNSL 182
            EFRKLGAT+++A+FSKVIIDTGK  LSAA AYC+S+LKTL++RELFEWIE EP Q+W+SL
Sbjct: 1834 EFRKLGATIIFANFSKVIIDTGKFSLSAAKAYCDSLLKTLQTRELFEWIELEPLQFWHSL 1893

Query: 183  LFMDLYNYGGIPAKLSIRSSEDDPLLEDAIMDDESQLEILSFWNIAENLPEPMQEQFNSV 362
            LFMD YNYGGIPA+    S  +           ESQ++I+S WNIAE LP+ +Q+ F  +
Sbjct: 1894 LFMDQYNYGGIPARADDISHSESQGAHS--QRQESQVDIVSSWNIAEYLPKTIQDHFVLI 1951

Query: 363  VAKFIYDPWKYAREEVENRAVSKMGISCTPSITGAAAEAFELRLTENLKKMIKSYLS-ML 539
            V++F++ PW+YA+++  N+A  +   SCTPSIT +AAE +E  + E LK  I +Y +  L
Sbjct: 1952 VSEFMFIPWEYAQKQDANKASLQDVSSCTPSITISAAETYESHIVEYLKGQISTYFTDKL 2011

Query: 540  LNIVNNDHRVFKGNDQSSNSQ-------------KGDPSLEFIKHVCAVLSLDQSVQHEV 680
            L IV       KG ++S N Q             K  P+LEFIKHVCAVL+LD +VQHEV
Sbjct: 2012 LGIVRETVLHMKGINKSENDQPSSGFPQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEV 2071

Query: 681  LIMRRNLLKSVRVREFAPEAEFQNLSSEFIIPDVICSFCNDRRDLHLGRDRTLLARGWHC 860
            L+MR+NLLK VRVREFAPEAEF +    F++P+VICS+CND RDL L RD  LLA+ W C
Sbjct: 2072 LVMRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRC 2131

Query: 861  TAPLCGQLYDHEVMENTLLQIMRQRERLYHLQDLVCMKCNLLKAAHISEHCICAGSFRCR 1040
              P CGQ YD E MEN LLQI+RQRERLYHLQDLVC++CN +KAAH++E C CAG++RC+
Sbjct: 2132 AVPQCGQPYDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCK 2191

Query: 1041 EDLSEFRSTMRLFLDVATNQNFQLLHECCSWILE 1142
            ED+SEFRS M++FL+VA +Q FQLL EC SWILE
Sbjct: 2192 EDVSEFRSKMQIFLNVAISQKFQLLQECTSWILE 2225


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  448 bits (1153), Expect = e-123
 Identities = 226/394 (57%), Positives = 285/394 (72%), Gaps = 14/394 (3%)
 Frame = +3

Query: 3    EFRKLGATVVYASFSKVIIDTGKTDLSAANAYCESVLKTLKSRELFEWIEFEPSQYWNSL 182
            EFRKLGAT+V+A+FSK+IIDTGK DLS A AYC+S+L+T++SR+LFEWIE EP Q+W SL
Sbjct: 1824 EFRKLGATIVFANFSKIIIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSL 1883

Query: 183  LFMDLYNYGGIPAKLSIRSSEDDPLLEDAIMDDESQLEILSFWNIAENLPEPMQEQFNSV 362
            LFMD YNYGGIP K             D  +++ESQ++I+S WNIAE LP+ +Q+ F  +
Sbjct: 1884 LFMDQYNYGGIPTK------------SDEAVNNESQVDIISSWNIAEYLPKKIQDHFVFI 1931

Query: 363  VAKFIYDPWKYAREEVENRAVSKMGISCTPSITGAAAEAFELRLTENLKKMIKSYLS-ML 539
            V++F+Y PW YA+++ + RA  + G SCTPSI   AAEAFE  +TE  K+ I SY +  L
Sbjct: 1932 VSQFMYIPWNYAKKQAQIRASLQNGDSCTPSINIGAAEAFESEITEFTKEQIGSYFTHKL 1991

Query: 540  LNIVNNDHRVFKGNDQSSNSQ-------------KGDPSLEFIKHVCAVLSLDQSVQHEV 680
            L IV++     KG ++  N+Q             +GD SLEFIKHVCAVL+LDQSVQHEV
Sbjct: 1992 LGIVHDIGLHMKGMNRLENNQSTSGLPPLTGDVHRGDASLEFIKHVCAVLALDQSVQHEV 2051

Query: 681  LIMRRNLLKSVRVREFAPEAEFQNLSSEFIIPDVICSFCNDRRDLHLGRDRTLLARGWHC 860
            L++R+NLLK V V+EFAPEA+F      FI+ +VICS+CND RDL L RD  LL   W C
Sbjct: 2052 LVLRKNLLKYVDVKEFAPEAKFHGPCHSFILSNVICSYCNDCRDLDLCRDSALLTEEWRC 2111

Query: 861  TAPLCGQLYDHEVMENTLLQIMRQRERLYHLQDLVCMKCNLLKAAHISEHCICAGSFRCR 1040
              P C Q YD EVMEN LLQ +RQRERLYHLQDLVC +C+ +KAAH++E C CAGSFRC+
Sbjct: 2112 AVPQCAQPYDREVMENALLQTVRQRERLYHLQDLVCTRCHQVKAAHLAEQCACAGSFRCK 2171

Query: 1041 EDLSEFRSTMRLFLDVATNQNFQLLHECCSWILE 1142
            ED SEFR  M++FL++A+ Q FQLL EC SWILE
Sbjct: 2172 EDASEFREKMQIFLNIASRQKFQLLQECTSWILE 2205