BLASTX nr result

ID: Lithospermum22_contig00026366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026366
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254...   117   4e-24
ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
ref|XP_002509671.1| splicing factor yt521-B, putative [Ricinus c...   100   5e-19
ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-l...    93   8e-17
ref|XP_002872637.1| hypothetical protein ARALYDRAFT_490016 [Arab...    84   6e-14

>ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254803 [Vitis vinifera]
          Length = 404

 Score =  117 bits (293), Expect = 4e-24
 Identities = 73/172 (42%), Positives = 105/172 (61%), Gaps = 15/172 (8%)
 Frame = +2

Query: 2   QELPQDIGEALCELIDRK-DVDVHMKRDDSY---------HMGPSMDLTNSFRDFTDNPS 151
           QEL Q+IGEALCEL+D K DV  +++++D            M PS  L     + +    
Sbjct: 191 QELSQEIGEALCELLDGKTDVGDNLRKNDFSGDDLPPRRPFMEPSCSLPGEEYNLSSMHM 250

Query: 152 GQIPLNLYPALLYQNQAEASIYHLARQRPSDT-IDERLSI---PHRASEAKRSKNNGRPS 319
               + LYP+LLYQ++AEA+ +HLA QR +   + E L I   P + +  K  + +G  +
Sbjct: 251 TWTSM-LYPSLLYQHKAEANRFHLAHQRSTGPFLPENLPISSGPSKVTRVKHPRISGNFT 309

Query: 320 RVHVDQEIPA-YDAWGFSSERSPLTSTITEDDILDMTYEEYLEAHSRGDNRL 472
            V VD ++ + +D W  S+ERSPL ST+TEDDIL+M+YEEYLEAHSR + +L
Sbjct: 310 SVQVDHDMSSGFDVWNMSAERSPLASTLTEDDILEMSYEEYLEAHSRSNKKL 361


>ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|222845340|gb|EEE82887.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  114 bits (285), Expect = 3e-23
 Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
 Frame = +2

Query: 2   QELPQDIGEALCELID-RKDVDVHMKRDDSYHMGPSMDLTNSFRDFT------DNPSGQI 160
           QELP+DIGEALCELID  +D D  +KRDD     P +D ++   D          P G+ 
Sbjct: 189 QELPEDIGEALCELIDGERDTDGMVKRDDLPMKRPCIDPSSYTGDGVYTVPPLQMPWGRT 248

Query: 161 PLNLYPALLYQNQAEASIYHLARQRPSDTIDERLSIPHRASEAKRSKNNGRPSRVHVDQE 340
           P   YP+ LYQ   EAS +HLA Q P+       ++   AS+  R K +   + + +  E
Sbjct: 249 PTP-YPSFLYQQHDEASRFHLAHQGPTGAGFTDNALSSGASKVARMKQSRNSTNLRIHCE 307

Query: 341 IPAY-DAWGFSSERSPLTSTITEDDILDMTYEEYLEAHSRGDNRL 472
           +P+  D WG S+E SPL ST+T+DD L+MTYEEYLE HSR   +L
Sbjct: 308 MPSRTDIWGLSAE-SPLASTLTDDDFLEMTYEEYLEVHSRSIKQL 351


>ref|XP_002509671.1| splicing factor yt521-B, putative [Ricinus communis]
           gi|223549570|gb|EEF51058.1| splicing factor yt521-B,
           putative [Ricinus communis]
          Length = 358

 Score =  100 bits (249), Expect = 5e-19
 Identities = 72/166 (43%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
 Frame = +2

Query: 2   QELPQDIGEALCELIDR-KDVDVHMKRDDSYHMGPSMDLTNSFRDFTDN-PSGQIPLNL- 172
           QELP+DIGEALCELID   D+D  +KRDD     P M+   S  D   N P   IP    
Sbjct: 189 QELPEDIGEALCELIDGDNDIDGMLKRDDIPLKRPRMEPPCSLGDEEYNVPPMHIPWVRT 248

Query: 173 ---YPALLYQNQAEASIYHLARQRPSDTIDERLSIPHRASEAKRSKNNGRPSRVHVDQEI 343
              Y + LYQ+ A AS +       S           + S  K S+ NG  + + V  ++
Sbjct: 249 PIPYSSFLYQHHAGASRFRAVNLPLSAGAS-------KVSRMKHSQVNGSLANLQVRNDM 301

Query: 344 PAY-DAWGFSSERSPLTSTITEDDILDMTYEEYLEAHSRGDNRLFY 478
           P+  DAWG S+E SP  ST+TEDD L+MTYEEYLEAHSR   +L +
Sbjct: 302 PSRSDAWGLSAE-SPHASTLTEDDFLEMTYEEYLEAHSRSIKQLSF 346


>ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
          Length = 396

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 71/170 (41%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
 Frame = +2

Query: 2   QELPQDIGEALCELIDRKD----VDVHMKRDDSYHMGPSMDLTNSFRDFTDN-----PSG 154
           QEL  DIG ALCEL+D K+    +   + RD+    G   +  +S  D   N      S 
Sbjct: 191 QELSPDIGLALCELLDGKNYTDCLPTSLSRDEFSLKGLYANTPSSMGDEDCNFPPLHTSW 250

Query: 155 QIPLNLYPALLYQNQAEASIYHLARQRPSDTIDERL----SIPHRASEAKRSKNNGRPSR 322
            +PL  Y AL YQNQ E + YH   QR S T+   +    S   + S  KRSK+    S 
Sbjct: 251 SMPLP-YSALFYQNQPEVNNYHSTNQRISGTMFTEILPTTSESSQVSGIKRSKDVASQS- 308

Query: 323 VHVDQEIPAYDAWGFSSERSPLTSTITEDDILDMTYEEYLEAHSRGDNRL 472
                     D WG SSE SPL ST+TEDD LDM+YEEYLE HSR   +L
Sbjct: 309 ----------DFWGLSSE-SPLASTLTEDDFLDMSYEEYLEVHSRCKKQL 347


>ref|XP_002872637.1| hypothetical protein ARALYDRAFT_490016 [Arabidopsis lyrata subsp.
           lyrata] gi|297318474|gb|EFH48896.1| hypothetical protein
           ARALYDRAFT_490016 [Arabidopsis lyrata subsp. lyrata]
          Length = 359

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 59/158 (37%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
 Frame = +2

Query: 2   QELPQDIGEALCELIDRKDVDVHM----KRDDSYHMGPSMDLTNSFRD--FTDNPSGQIP 163
           QELP+DIGEALCEL+D    D  +     RDD        +  +S  D  + +N  G  P
Sbjct: 193 QELPEDIGEALCELLDANSCDDGLLNSSSRDDYSTKKSRAEPPSSSGDEEYNNNLWGHTP 252

Query: 164 LNLYPALLYQNQAEASIYHLARQRPSDTIDERLSIPHRASEAKRSKNNGRPSRVHVDQEI 343
           +  YP  +Y NQ + S +HLA Q       E L   H +S A  S+     S        
Sbjct: 253 MP-YPPAVYANQDDLSRFHLAHQIGYGVSSEYL---HTSSGASNSRTEQEKSL------- 301

Query: 344 PAYDAWGFSSERSPLTSTITEDDILDMTYEEYLEAHSR 457
             +++W    E SPL +++T+DD LDM+YEEY+E HSR
Sbjct: 302 -RFNSWCLPLE-SPLANSLTDDDFLDMSYEEYVETHSR 337


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