BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026358
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...   173   1e-41
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   162   2e-38
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   150   1e-34

>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/128 (63%), Positives = 103/128 (80%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           HG+ IK++LGSDLFI NSLIHCYA CG  D AYS+F+ ++++DVVSWNS+IKGF + GC 
Sbjct: 155 HGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCP 214

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAI 25
            KAL+LF  M+ EN+RPNDVTM+GVL+AC KK DLE GR +  YIE+NGI   L ++NA+
Sbjct: 215 DKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAM 274

Query: 24  LDMYMKCG 1
           LDMY+K G
Sbjct: 275 LDMYVKNG 282



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 DLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCAYKALDLFHRME 172
           D+F   ++I  YA+    D A S+F +M  +D+ +WN +I  +  DG   +AL +FH ++
Sbjct: 298 DIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQ 357

Query: 171 -EENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAILDMYMKCG 1
             +  +P++VT++  L+AC +   +++G WIH YI+K  IK    L  +++DMY KCG
Sbjct: 358 LSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCG 415



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/113 (32%), Positives = 60/113 (53%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           H  + K ++  +  +  SLI  Y++CG  + A  +F S+  RDV  W+++I G +M G  
Sbjct: 389 HVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRG 448

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQI 46
             A+DLF  M+E  +RPN VT   +L AC     +  GR     +E +  K++
Sbjct: 449 RAAIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGRMFFNQMESSTFKRL 501


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/128 (57%), Positives = 96/128 (75%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           HG+VIK  LGSD+FI NSLIH YA+CG   + Y +F+++  RDVVSWNS+I  F   GC 
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAI 25
            +AL+LF  ME +N++PN +TM+GVL+AC KK D E GRW+H YIE+N I + L L+NA+
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278

Query: 24  LDMYMKCG 1
           LDMY KCG
Sbjct: 279 LDMYTKCG 286



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 32/160 (20%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDG-- 211
           H  + ++ +G  L ++N+++  Y +CGS + A  LF  M ++D+VSW +++ G++  G  
Sbjct: 260 HSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY 319

Query: 210 ----------------------CAYK-------ALDLFHRME-EENLRPNDVTMIGVLTA 121
                                  AY+       AL+LFH ++  +  +P++VT++  L+A
Sbjct: 320 DAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSA 379

Query: 120 CGKKRDLELGRWIHEYIEKNGIKQILPLNNAILDMYMKCG 1
           C +   ++LG WIH YI+K G+K    L  +++DMY KCG
Sbjct: 380 CAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           H  + K  +  +  +  SLI  Y +CG    A  +F S++ +DV  W+++I G +M G  
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIE 67
             A+ LF +M+E+ ++PN VT   +L AC     +E GR     +E
Sbjct: 453 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQME 498


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/128 (57%), Positives = 95/128 (74%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           HG+VIK  LGSD+FI NSLIH YA+CG   + Y +F++   RDVVSWNS+I  F   GC 
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAI 25
            +AL+LF  ME +N++PN +TM+GVL+AC KK D E GRW+H YIE+N I + L L+NA+
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAM 278

Query: 24  LDMYMKCG 1
           LDMY KCG
Sbjct: 279 LDMYTKCG 286



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSII--------- 232
           H  + ++ +   L ++N+++  Y +CGS + A  LF  M ++D+VSW +++         
Sbjct: 260 HSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY 319

Query: 231 ---KGFSMDGCAYKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIE 67
              +G +M G    A+ LF +M+E+ ++PN VT   +L AC     +E GR     +E
Sbjct: 320 DAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQME 377


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/128 (57%), Positives = 96/128 (75%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           HG+V+K++ GSDLFI+NSLIH Y+  G  D AY +F  + ++D+VSWNS+I GF   G  
Sbjct: 154 HGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSP 213

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAI 25
            +AL LF RM+ EN RPN VTM+GVL+AC K+ DLE GRW  +YIE+NGI   L L+NA+
Sbjct: 214 EEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAM 273

Query: 24  LDMYMKCG 1
           LDMY+KCG
Sbjct: 274 LDMYVKCG 281



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 DLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCAYKALDLFHRME 172
           D+    ++I  YA+ G  D A  +F  M   D+ +WN++I  +  +G   +AL +F  ++
Sbjct: 297 DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356

Query: 171 -EENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAILDMYMKCG 1
             +N +PN+VT+   L AC +   ++LG WIH YI+K GIK    +  +++DMY KCG
Sbjct: 357 LNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCG 414



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/99 (35%), Positives = 56/99 (56%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           H  + K  +  +  I  SLI  Y++CG  + A  +F S++ RDV  W+++I G +M G  
Sbjct: 388 HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHG 447

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGR 88
             A+DLF +M+E  ++PN VT   +L AC     ++ GR
Sbjct: 448 RAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGR 486


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           HG+ IKS +GSD+F+ NSLIHCY  CG  D A  +F ++K++DVVSWNS+I GF   G  
Sbjct: 156 HGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 215

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTACGKKRDLELGRWIHEYIEKNGIKQILPLNNAI 25
            KAL+LF +ME E+++ + VTM+GVL+AC K RDLE GR +  YIE+N +   L L NA+
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAM 275

Query: 24  LDMYMKCG 1
           LDMY KCG
Sbjct: 276 LDMYTKCG 283



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 32/155 (20%)
 Frame = -2

Query: 369 KSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRD---------------------- 256
           ++ +  +L + N+++  Y +CGS + A  LF +M+++D                      
Sbjct: 262 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 321

Query: 255 ---------VVSWNSIIKGFSMDGCAYKALDLFHRME-EENLRPNDVTMIGVLTACGKKR 106
                    +V+WN++I  +  +G   +AL +FH ++ ++N++ N +T++  L+AC +  
Sbjct: 322 VLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVG 381

Query: 105 DLELGRWIHEYIEKNGIKQILPLNNAILDMYMKCG 1
            LELGRWIH YI+KNGIK    + +A++ MY KCG
Sbjct: 382 ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCG 416



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 33/89 (37%), Positives = 59/89 (66%)
 Frame = -2

Query: 384 HGLVIKSNLGSDLFINNSLIHCYAECGSSDMAYSLFLSMKDRDVVSWNSIIKGFSMDGCA 205
           H  + K+ +  + ++ ++LIH Y++CG  + A  +F S++ RDV  W+++I G +M GC 
Sbjct: 390 HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCG 449

Query: 204 YKALDLFHRMEEENLRPNDVTMIGVLTAC 118
            +A+D+F++M+E N++PN VT   V  AC
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCAC 478