BLASTX nr result

ID: Lithospermum22_contig00026338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026338
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30928.3| unnamed protein product [Vitis vinifera]              323   4e-86
ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...   323   5e-86
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]   323   5e-86
ref|XP_002863421.1| F-box family protein [Arabidopsis lyrata sub...   322   9e-86
ref|XP_002305042.1| f-box family protein [Populus trichocarpa] g...   321   2e-85

>emb|CBI30928.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  323 bits (828), Expect = 4e-86
 Identities = 166/209 (79%), Positives = 179/209 (85%)
 Frame = +1

Query: 1   VLLKWRAEFGSTLDNCVILGAASVGHRNPKDEPLPAFNESNGTGNGEGDNGSIPESFYTN 180
           VLLKWRA+FGSTLDNCVILGAASV    P          + G+G  + DNGSIPESFYTN
Sbjct: 200 VLLKWRADFGSTLDNCVILGAASVICPGP----------TKGSGVQDNDNGSIPESFYTN 249

Query: 181 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLSNLVLTDADGQGVLCMNKEQLEELRV 360
           GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTL +LVLTDADGQGVLCMN++QLEELRV
Sbjct: 250 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNRDQLEELRV 309

Query: 361 KPLSASSASKRTLVPALNMRLWYAPHLDLPDGTILKGATLVAIRPSEHPKKDVVCGDGNW 540
           KPLSASSASKRTLVPALNMRLWYAPHL+LPDG +LKGATLVAIRPSE         DG+W
Sbjct: 310 KPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAIRPSEQSVTKKEVSDGSW 369

Query: 541 VASAFEEPYLTAAKMLLKRRTYCLEMNSF 627
           V++AFEEPY TAAKML+KRRTYCLEMNSF
Sbjct: 370 VSAAFEEPYGTAAKMLVKRRTYCLEMNSF 398


>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
           gi|359483890|ref|XP_003633032.1| PREDICTED: F-box
           protein At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score =  323 bits (827), Expect = 5e-86
 Identities = 167/211 (79%), Positives = 180/211 (85%), Gaps = 2/211 (0%)
 Frame = +1

Query: 1   VLLKWRAEFGSTLDNCVILGAASVGHRNPKDEP--LPAFNESNGTGNGEGDNGSIPESFY 174
           VLLKWRA+FGSTLDNCVILGAASV    P        + N++    NG  DNGSIPESFY
Sbjct: 189 VLLKWRADFGSTLDNCVILGAASVICPGPTKGSGVQDSGNDAFCVSNGGDDNGSIPESFY 248

Query: 175 TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLSNLVLTDADGQGVLCMNKEQLEEL 354
           TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTL +LVLTDADGQGVLCMN++QLEEL
Sbjct: 249 TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNRDQLEEL 308

Query: 355 RVKPLSASSASKRTLVPALNMRLWYAPHLDLPDGTILKGATLVAIRPSEHPKKDVVCGDG 534
           RVKPLSASSASKRTLVPALNMRLWYAPHL+LPDG +LKGATLVAIRPSE         DG
Sbjct: 309 RVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAIRPSEQSVTKKEVSDG 368

Query: 535 NWVASAFEEPYLTAAKMLLKRRTYCLEMNSF 627
           +WV++AFEEPY TAAKML+KRRTYCLEMNSF
Sbjct: 369 SWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score =  323 bits (827), Expect = 5e-86
 Identities = 170/215 (79%), Positives = 181/215 (84%), Gaps = 6/215 (2%)
 Frame = +1

Query: 1   VLLKWRAEFGSTLDNCVILGAASVGHRNP------KDEPLPAFNESNGTGNGEGDNGSIP 162
           VLLKWRA+FGSTLDNCVILGAASV    P      +D    AF  SNG      DNGSIP
Sbjct: 189 VLLKWRADFGSTLDNCVILGAASVICPGPTKGSGVQDSGXDAFCVSNGGD----DNGSIP 244

Query: 163 ESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLSNLVLTDADGQGVLCMNKEQ 342
           ESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTL +LVLTDADGQGVLCMN++Q
Sbjct: 245 ESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNRDQ 304

Query: 343 LEELRVKPLSASSASKRTLVPALNMRLWYAPHLDLPDGTILKGATLVAIRPSEHPKKDVV 522
           LEELRVKPLSASSASKRTLVPALNMRLWYAPHL+LPDG +LKGATLVAIRPSE       
Sbjct: 305 LEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAIRPSEQSVTKKE 364

Query: 523 CGDGNWVASAFEEPYLTAAKMLLKRRTYCLEMNSF 627
             DG+WV++AFEEPY TAAKML+KRRTYCLEMNSF
Sbjct: 365 VSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>ref|XP_002863421.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309256|gb|EFH39680.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  322 bits (825), Expect = 9e-86
 Identities = 168/211 (79%), Positives = 184/211 (87%), Gaps = 2/211 (0%)
 Frame = +1

Query: 1   VLLKWRAEFGSTLDNCVILGAASVGHRNPK--DEPLPAFNESNGTGNGEGDNGSIPESFY 174
           VLLKWRAEFGSTLDNCVILGA+SV   NP    + +        +G+G  DNGSIPESFY
Sbjct: 185 VLLKWRAEFGSTLDNCVILGASSVIQPNPMRISQAVDTSTVVEASGSGSDDNGSIPESFY 244

Query: 175 TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLSNLVLTDADGQGVLCMNKEQLEEL 354
           TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTL +LVLTD+DGQGVLCMN+EQLEEL
Sbjct: 245 TNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNREQLEEL 304

Query: 355 RVKPLSASSASKRTLVPALNMRLWYAPHLDLPDGTILKGATLVAIRPSEHPKKDVVCGDG 534
           RVKPL+ASSASKRTLVPALNMRLWYAP L+LPDGT+LKGATLVAIRPSE  K++V   D 
Sbjct: 305 RVKPLAASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSE-SKREV--SDI 361

Query: 535 NWVASAFEEPYLTAAKMLLKRRTYCLEMNSF 627
           +WV+SAFEEPY TAAKML+KRRTYCLEMNSF
Sbjct: 362 SWVSSAFEEPYETAAKMLVKRRTYCLEMNSF 392


>ref|XP_002305042.1| f-box family protein [Populus trichocarpa]
           gi|222848006|gb|EEE85553.1| f-box family protein
           [Populus trichocarpa]
          Length = 398

 Score =  321 bits (823), Expect = 2e-85
 Identities = 167/211 (79%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
 Frame = +1

Query: 1   VLLKWRAEFGSTLDNCVILGAASVGHRNPKDEPLPAFNESNGTGNGEGDNGSIPESFYTN 180
           VLLKWRA+FGSTLDNCVILGAASV   N     +   N +      + DNGSIPESFYTN
Sbjct: 190 VLLKWRADFGSTLDNCVILGAASVITNNKISSAMQQENAAAAAAADDDDNGSIPESFYTN 249

Query: 181 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLSNLVLTDADGQGVLCMNKEQLEELRV 360
           GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTL +LVL DADGQGVLCMN+EQLEELRV
Sbjct: 250 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLADADGQGVLCMNREQLEELRV 309

Query: 361 KPLSASSASKRTLVPALNMRLWYAPHLDLPDGTILKGATLVAIRPSEH--PKKDVVCGDG 534
           KPLSASSASKRTLVPALNMRLWYAPHL+LPDG +LKGATLVAIRPSE    KKDV   D 
Sbjct: 310 KPLSASSASKRTLVPALNMRLWYAPHLELPDGVVLKGATLVAIRPSEQAATKKDV--SDV 367

Query: 535 NWVASAFEEPYLTAAKMLLKRRTYCLEMNSF 627
           +WV++ FEEPY TAAKML+KRRTYCLEMNSF
Sbjct: 368 SWVSTTFEEPYGTAAKMLVKRRTYCLEMNSF 398


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