BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026269
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     162   9e-38
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   161   2e-37
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   155   2e-35
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     155   2e-35
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   154   2e-35

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  162 bits (410), Expect = 9e-38
 Identities = 79/107 (73%), Positives = 90/107 (84%)
 Frame = +1

Query: 556  LLLPSDFICRPIEYKWVFKKKHDKDGNVDVFKARLVEKGFKQVHGVDYDETYSPVAMLKS 735
            L+ P D + + IE KW+FKKK D DGNV ++KARLV KGFKQ+ GVDYDET+SPVAMLKS
Sbjct: 829  LVDPPDGV-KTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKS 887

Query: 736  IRIILAIAAFHDYEIWQMDVKTAFLNGNLEEDVYMVQPPGFTCPKGP 876
            IRIILAIAA+ DYEIWQMDVKTAFLNGNL EDVYM+QP GF  P+ P
Sbjct: 888  IRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESP 934


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  161 bits (407), Expect = 2e-37
 Identities = 74/96 (77%), Positives = 84/96 (87%)
 Frame = +1

Query: 583 RPIEYKWVFKKKHDKDGNVDVFKARLVEKGFKQVHGVDYDETYSPVAMLKSIRIILAIAA 762
           +PIE KW+FKKK D DGN+ ++KA LV KG+KQVHG+DYDETYSPVAMLKSIRI+LA AA
Sbjct: 484 KPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAA 543

Query: 763 FHDYEIWQMDVKTAFLNGNLEEDVYMVQPPGFTCPK 870
            +DYEIWQMDVKTAFLNGNLEE VYM QP GFT P+
Sbjct: 544 HYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPE 579


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  155 bits (391), Expect = 2e-35
 Identities = 73/96 (76%), Positives = 82/96 (85%)
 Frame = +1

Query: 583  RPIEYKWVFKKKHDKDGNVDVFKARLVEKGFKQVHGVDYDETYSPVAMLKSIRIILAIAA 762
            R IE KW FKKK D DGNV ++KARLV KGF+Q+ GVDYDET+ PVAMLKSIRI+LAIAA
Sbjct: 760  RAIECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAA 819

Query: 763  FHDYEIWQMDVKTAFLNGNLEEDVYMVQPPGFTCPK 870
            + DYEIWQMDVKTAFLNGNL+EDVYM QP GF  P+
Sbjct: 820  YFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQ 855


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  155 bits (391), Expect = 2e-35
 Identities = 73/96 (76%), Positives = 82/96 (85%)
 Frame = +1

Query: 583 RPIEYKWVFKKKHDKDGNVDVFKARLVEKGFKQVHGVDYDETYSPVAMLKSIRIILAIAA 762
           R IE KW FKKK D DGNV ++KARLV KGF+Q+ GVDYDET+ PVAMLKSIRI+LAIAA
Sbjct: 702 RAIECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAA 761

Query: 763 FHDYEIWQMDVKTAFLNGNLEEDVYMVQPPGFTCPK 870
           + DYEIWQMDVKTAFLNGNL+EDVYM QP GF  P+
Sbjct: 762 YFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQ 797


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  154 bits (390), Expect = 2e-35
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = +1

Query: 556 LLLPSDFICRPIEYKWVFKKKHDKDGNVDVFKARLVEKGFKQVHGVDYDETYSPVAMLKS 735
           L+ P D + + IE KWVFKKK D DGNV ++KARLV KGF+Q+ GV+YDET+SPVAMLKS
Sbjct: 383 LVDPLDSV-KAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKS 441

Query: 736 IRIILAIAAFHDYEIWQMDVKTAFLNGNLEEDVYMVQPPGFTCPK 870
           IRI+LAIAA+ DYEIWQMDVKTAFL+GNL+EDVYM QP GF  P+
Sbjct: 442 IRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVDPQ 486