BLASTX nr result

ID: Lithospermum22_contig00026259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026259
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   121   5e-26
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...   121   5e-26
ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   118   4e-25
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   116   2e-24
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...   116   2e-24

>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/83 (74%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   EPYEEGEHLVQASXXXXXXXXXXXXXHDSNHRVLLFAQMTQTLDILQDFLELRRYSYERL 182
           EPYEEGEHLV+AS             HDS HRVLLFAQMT TLDILQDFLELR+YSYERL
Sbjct: 348 EPYEEGEHLVKASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERL 407

Query: 183 DGSIRAEERFAAIRSFSQQSAQS 251
           DGS+RAEERFAAIRSFS QS +S
Sbjct: 408 DGSVRAEERFAAIRSFSGQSGRS 430


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
           gi|222835142|gb|EEE73577.1| hypothetical protein
           POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/83 (74%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   EPYEEGEHLVQASXXXXXXXXXXXXXHDSNHRVLLFAQMTQTLDILQDFLELRRYSYERL 182
           EPYEEGEHLV+AS             HDS HRVLLFAQMT TLDILQDFLELR+YSYERL
Sbjct: 357 EPYEEGEHLVKASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERL 416

Query: 183 DGSIRAEERFAAIRSFSQQSAQS 251
           DGS+RAEERFAAIRSFS QS +S
Sbjct: 417 DGSVRAEERFAAIRSFSGQSGRS 439


>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/81 (76%), Positives = 63/81 (77%)
 Frame = +3

Query: 3    EPYEEGEHLVQASXXXXXXXXXXXXXHDSNHRVLLFAQMTQTLDILQDFLELRRYSYERL 182
            EPYEEGEHLVQAS             H S HRVLLFAQMT TLDILQDFLELR+YSYERL
Sbjct: 957  EPYEEGEHLVQASGKLLILDQLLQKLHYSGHRVLLFAQMTHTLDILQDFLELRKYSYERL 1016

Query: 183  DGSIRAEERFAAIRSFSQQSA 245
            DGSIRAEERFAAIRSFS  SA
Sbjct: 1017 DGSIRAEERFAAIRSFSSSSA 1037


>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 1-like [Cucumis sativus]
          Length = 867

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/80 (75%), Positives = 62/80 (77%)
 Frame = +3

Query: 3   EPYEEGEHLVQASXXXXXXXXXXXXXHDSNHRVLLFAQMTQTLDILQDFLELRRYSYERL 182
           EPYEEGEHLVQAS             H+S HRVLLFAQMT TLDILQDFLELR +SYERL
Sbjct: 350 EPYEEGEHLVQASGKLVVLDQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERL 409

Query: 183 DGSIRAEERFAAIRSFSQQS 242
           DGSIRAEERFAAIRSFS  S
Sbjct: 410 DGSIRAEERFAAIRSFSSNS 429


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Cucumis sativus]
          Length = 868

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/80 (75%), Positives = 62/80 (77%)
 Frame = +3

Query: 3   EPYEEGEHLVQASXXXXXXXXXXXXXHDSNHRVLLFAQMTQTLDILQDFLELRRYSYERL 182
           EPYEEGEHLVQAS             H+S HRVLLFAQMT TLDILQDFLELR +SYERL
Sbjct: 350 EPYEEGEHLVQASGKLVVLDQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERL 409

Query: 183 DGSIRAEERFAAIRSFSQQS 242
           DGSIRAEERFAAIRSFS  S
Sbjct: 410 DGSIRAEERFAAIRSFSSNS 429


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