BLASTX nr result

ID: Lithospermum22_contig00026219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026219
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   101   7e-20
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15

>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%)
 Frame = +2

Query: 32  SARLVFTTIENPLLDITLWNALIAAYSKNSMFSQAFQLFQKLVNFGSLKPDYYTYPSVLK 211
           SA+LVF TIENPL DITLWN L+AA +KN +F +  ++F +L++F  LKPD +TYPSVLK
Sbjct: 56  SAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLK 114

Query: 212 ACTGLGIERCGTLVHSHVLKNG 277
           AC+GLG    G +VH+HV+K+G
Sbjct: 115 ACSGLGRVGYGKMVHTHVIKSG 136


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%)
 Frame = +2

Query: 32  SARLVFTTIENPLLDITLWNALIAAYSKNSMFSQAFQLFQKLVNFGSLKPDYYTYPSVLK 211
           SA+LVF TIENPL DITLWN L+AA +KN +F +  ++F +L++F  LKPD +TYPSVLK
Sbjct: 248 SAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLK 306

Query: 212 ACTGLGIERCGTLVHSHVLKNG 277
           AC+GLG    G +VH+HV+K+G
Sbjct: 307 ACSGLGRVGYGKMVHTHVIKSG 328


>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
           gi|449481162|ref|XP_004156100.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/87 (51%), Positives = 60/87 (68%)
 Frame = +2

Query: 23  DVTSARLVFTTIENPLLDITLWNALIAAYSKNSMFSQAFQLFQKLVNFGSLKPDYYTYPS 202
           D  SA LVF T + PL D++LWNAL++AY+ N  F +A QLF +L     ++PD+YTYP 
Sbjct: 53  DYASAELVFQTNDCPL-DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPV 111

Query: 203 VLKACTGLGIERCGTLVHSHVLKNGLL 283
           VLKAC GLG    G  +H+H+LK GL+
Sbjct: 112 VLKACGGLGRVIYGRRIHNHLLKTGLI 138


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/83 (50%), Positives = 61/83 (73%)
 Frame = +2

Query: 35  ARLVFTTIENPLLDITLWNALIAAYSKNSMFSQAFQLFQKLVNFGSLKPDYYTYPSVLKA 214
           A+ VF  +ENP  +I+LWN L+A Y+KN M+ +A +LF+KL+++  LKPD YTYPSVLKA
Sbjct: 57  AKCVFDNMENPC-EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKA 115

Query: 215 CTGLGIERCGTLVHSHVLKNGLL 283
           C GL     G ++H+ ++K GL+
Sbjct: 116 CGGLYKYVLGKMIHTCLVKTGLM 138


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = +2

Query: 35  ARLVFTTIENPLLDITLWNALIAAYSKNSMFSQAFQLFQKLVNFGSLKPDYYTYPSVLKA 214
           A+ VF  +ENP  +I+LWN L+A Y+KN M+ +A +LF+KL+++  LKPD YTYPSV KA
Sbjct: 57  AKCVFDNMENPC-EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKA 115

Query: 215 CTGLGIERCGTLVHSHVLKNGLL 283
           C GL     G ++H+ ++K GL+
Sbjct: 116 CGGLHRYVLGKMIHTCLIKTGLM 138


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