BLASTX nr result

ID: Lithospermum22_contig00026152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026152
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...    62   6e-08
ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   2e-07
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   2e-07
gb|ACT21194.1| zinc finger protein [Carica papaya]                     60   2e-07

>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371
           Q YFCYQC+RTVTIT +P+SDL CPNCQ GFLEE E P
Sbjct: 11  QLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESP 48


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
           unknown [Populus trichocarpa]
           gi|222870634|gb|EEF07765.1| predicted protein [Populus
           trichocarpa]
          Length = 345

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = +3

Query: 258 SQQYFCYQCERTVTITTPSSDLVCPNCQGGFLEEYEPP 371
           SQ YFCYQC RTVTIT P++ L CPNC  GFLEE + P
Sbjct: 9   SQLYFCYQCNRTVTITPPTTALSCPNCHEGFLEELDSP 46


>ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356531054|ref|XP_003534093.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 376

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371
           +QYFC+QC RTV+I+ +PSSDL+CP C GGFLEE E P
Sbjct: 18  RQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEIP 55


>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 369

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371
           +QYFC+QC RTV+I+ +PSSDL+CP C GGFLEE E P
Sbjct: 18  RQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEFP 55


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
 Frame = +3

Query: 255 ASQQYFCYQCERTVTITT---PSSDLVCPNCQGGFLEEYEPP 371
           + Q YFCYQC RTV I+    PSSDL+CP C GGFLEE E P
Sbjct: 4   SGQPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELENP 45


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