BLASTX nr result
ID: Lithospermum22_contig00026152
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00026152 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1... 62 6e-08 ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 60 2e-07 ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 60 2e-07 gb|ACT21194.1| zinc finger protein [Carica papaya] 60 2e-07 >ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1| predicted protein [Populus trichocarpa] Length = 323 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +3 Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371 Q YFCYQC+RTVTIT +P+SDL CPNCQ GFLEE E P Sbjct: 11 QLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESP 48 >ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1| unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1| predicted protein [Populus trichocarpa] Length = 345 Score = 61.6 bits (148), Expect = 6e-08 Identities = 26/38 (68%), Positives = 29/38 (76%) Frame = +3 Query: 258 SQQYFCYQCERTVTITTPSSDLVCPNCQGGFLEEYEPP 371 SQ YFCYQC RTVTIT P++ L CPNC GFLEE + P Sbjct: 9 SQLYFCYQCNRTVTITPPTTALSCPNCHEGFLEELDSP 46 >ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine max] gi|356531054|ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Glycine max] Length = 376 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +3 Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371 +QYFC+QC RTV+I+ +PSSDL+CP C GGFLEE E P Sbjct: 18 RQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEIP 55 >ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max] Length = 369 Score = 59.7 bits (143), Expect = 2e-07 Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +3 Query: 261 QQYFCYQCERTVTIT-TPSSDLVCPNCQGGFLEEYEPP 371 +QYFC+QC RTV+I+ +PSSDL+CP C GGFLEE E P Sbjct: 18 RQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEFP 55 >gb|ACT21194.1| zinc finger protein [Carica papaya] Length = 340 Score = 59.7 bits (143), Expect = 2e-07 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 3/42 (7%) Frame = +3 Query: 255 ASQQYFCYQCERTVTITT---PSSDLVCPNCQGGFLEEYEPP 371 + Q YFCYQC RTV I+ PSSDL+CP C GGFLEE E P Sbjct: 4 SGQPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELENP 45