BLASTX nr result

ID: Lithospermum22_contig00026133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026133
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana...    63   2e-08
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...    62   4e-08
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...    60   2e-07
ref|XP_002977889.1| hypothetical protein SELMODRAFT_417691 [Sela...    59   5e-07
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...    58   7e-07

>ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|79317517|ref|NP_001031018.1| Nucleoporin
           autopeptidase [Arabidopsis thaliana]
           gi|19310423|gb|AAL84948.1| At1g10390/F14N23_29
           [Arabidopsis thaliana] gi|27764948|gb|AAO23595.1|
           At1g10390/F14N23_29 [Arabidopsis thaliana]
           gi|110742211|dbj|BAE99032.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190453|gb|AEE28574.1|
           Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|332190454|gb|AEE28575.1| Nucleoporin autopeptidase
           [Arabidopsis thaliana]
          Length = 1041

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/108 (39%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
 Frame = +3

Query: 3   GSQTGGSPLGSNPVFGATSS-AFGSSTPXXXXXXXXXXXXXXX---QKPXXXXXXXXXXX 170
           G+    SP  S P FGA+SS AFG+STP                  QKP           
Sbjct: 65  GAPQTSSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQSNPF 124

Query: 171 XXXXXXXXXXXXXXXXNNLFGSSTPFGAQSQPAFGTPSTPAFGATSSP 314
                           N  FGSSTPFGA + PAFG PSTP+FGATS+P
Sbjct: 125 GNSTQQSQPAFG----NTSFGSSTPFGATNTPAFGAPSTPSFGATSTP 168


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/124 (35%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
 Frame = +3

Query: 3   GSQTGGSPLG-------------------SNPVFGATSSAFGSS-TPXXXXXXXXXXXXX 122
           GSQTGGS  G                   S+P FG++  AFGSS TP             
Sbjct: 43  GSQTGGSIFGGTSTGVFGTAQPASPFGASSSPAFGSSQPAFGSSSTPAFGSSSSSFGGSS 102

Query: 123 XXQKPXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLFGSSTPFGAQSQPAFGTPSTPAFGA 302
              +                            +++FGSSTPFGA SQPAFG  STPAFGA
Sbjct: 103 VFGQKPAFGGFGSTPTQTSPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGA 162

Query: 303 TSSP 314
           TS+P
Sbjct: 163 TSTP 166


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/103 (40%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +3

Query: 15  GGSPLGSNPVFGATSSAFGSS-TPXXXXXXXXXXXXXXX--QKPXXXXXXXXXXXXXXXX 185
           GGS   S+P FGAT S FGSS TP                 QKP                
Sbjct: 77  GGS---SSPAFGATPSTFGSSSTPAFGSSSSSSFGGSSIFGQKPLFGGFGSTPAQTNPFG 133

Query: 186 XXXXXXXXXXXNNLFGSSTPFGAQSQPAFGTPSTPAFGATSSP 314
                      +N+FGSS+PFGA SQ AFG  STPAFG+TS+P
Sbjct: 134 STNQQSQPAFGSNVFGSSSPFGAPSQSAFGATSTPAFGSTSTP 176


>ref|XP_002977889.1| hypothetical protein SELMODRAFT_417691 [Selaginella moellendorffii]
           gi|300154592|gb|EFJ21227.1| hypothetical protein
           SELMODRAFT_417691 [Selaginella moellendorffii]
          Length = 162

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/102 (44%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
 Frame = -3

Query: 304 VAPNAGVLGVPNAG*--LCAPK-GVDDPNRLFPKAXXXXXXCPPNGLDWVVLDPKPPKAG 134
           V PNAGVL  PNAG   +  PK GV+ PN   PK        P  G++     PK    G
Sbjct: 6   VLPNAGVLLKPNAGVDGVVLPKTGVEPPNAGLPKTGVLL---PNAGVE----APKAGAVG 58

Query: 133 FWPNPDEPKADVEAPKAGVELPKAE--DVAPKTGLDPNGEPP 14
            W    EP   VE PKAGVELP +   D  P  GLDP   PP
Sbjct: 59  VWVGV-EPNTGVEDPKAGVELPNSPPLDAPPNAGLDPKRLPP 99


>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
           [Glycine max]
          Length = 1010

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/124 (33%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
 Frame = +3

Query: 3   GSQTGGSPLG-------------------SNPVFGATSSAF-GSSTPXXXXXXXXXXXXX 122
           GSQTGGS  G                   S+P FG++  AF  SSTP             
Sbjct: 44  GSQTGGSIFGGTSTGVFGTAQPSSPFGASSSPAFGSSQPAFVSSSTPAFGSSSSSFGGSS 103

Query: 123 XXQKPXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLFGSSTPFGAQSQPAFGTPSTPAFGA 302
              +                            +++FGSSTPFGA SQPAFG  S PAFGA
Sbjct: 104 VFGQKPAFGGFGSTPTQTTPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSNPAFGA 163

Query: 303 TSSP 314
           TS+P
Sbjct: 164 TSTP 167


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