BLASTX nr result

ID: Lithospermum22_contig00026089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026089
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19970.3| unnamed protein product [Vitis vinifera]               90   1e-15
ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267...    90   1e-15
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]    90   1e-15
ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|2...    67   8e-09
ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [...    62   3e-07

>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
 Frame = -1

Query: 357 PCYDKGSDPPRWSDR-KSGPLRSSQTCKDFVVGMCRRGSQCRFLHSDNV-LRDDESLDSD 184
           P  D   D   +S+R ++G   SSQ C+DFV G C RGSQCRFLH DN+  RD    + D
Sbjct: 289 PHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRSEID 348

Query: 183 ISGRWKGKQEPGHGSK---------YHYDKIA-NKFSNVYNGEND-PLRTRPRGAIICRD 37
            +  W+ +QE    S+         Y  DK+A   + N Y+GE D P+R   R  + C D
Sbjct: 349 QAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVRCND 408

Query: 36  FVKGNCRYGESC 1
           F+KG C  G SC
Sbjct: 409 FLKGKCHRGSSC 420


>ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
          Length = 913

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
 Frame = -1

Query: 357 PCYDKGSDPPRWSDR-KSGPLRSSQTCKDFVVGMCRRGSQCRFLHSDNV-LRDDESLDSD 184
           P  D   D   +S+R ++G   SSQ C+DFV G C RGSQCRFLH DN+  RD    + D
Sbjct: 164 PHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRSEID 223

Query: 183 ISGRWKGKQEPGHGSK---------YHYDKIA-NKFSNVYNGEND-PLRTRPRGAIICRD 37
            +  W+ +QE    S+         Y  DK+A   + N Y+GE D P+R   R  + C D
Sbjct: 224 QAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVRCND 283

Query: 36  FVKGNCRYGESC 1
           F+KG C  G SC
Sbjct: 284 FLKGKCHRGSSC 295


>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
          Length = 913

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
 Frame = -1

Query: 357 PCYDKGSDPPRWSDR-KSGPLRSSQTCKDFVVGMCRRGSQCRFLHSDNV-LRDDESLDSD 184
           P  D   D   +S+R ++G   SSQ C+DFV G C RGSQCRFLH DN+  RD    + D
Sbjct: 164 PHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRSEID 223

Query: 183 ISGRWKGKQEPGHGSK---------YHYDKIA-NKFSNVYNGEND-PLRTRPRGAIICRD 37
            +  W+ +QE    S+         Y  DK+A   + N Y+GE D P+R   R  + C D
Sbjct: 224 QAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVRCND 283

Query: 36  FVKGNCRYGESC 1
           F+KG C  G SC
Sbjct: 284 FLKGKCHRGSSC 295


>ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|222856469|gb|EEE94016.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 40/119 (33%), Positives = 59/119 (49%)
 Frame = -1

Query: 357 PCYDKGSDPPRWSDRKSGPLRSSQTCKDFVVGMCRRGSQCRFLHSDNVLRDDESLDSDIS 178
           P Y  G +   +   +S    S+Q CKDFV G CRRGS C+FLH D    +D+       
Sbjct: 140 PVYGFGRESGAYDRTRSRSGVSAQLCKDFVAGRCRRGSHCQFLHQDTETYEDD------- 192

Query: 177 GRWKGKQEPGHGSKYHYDKIANKFSNVYNGENDPLRTRPRGAIICRDFVKGNCRYGESC 1
             W+  ++            A+K+   ++ +  P+ +  R A  C +F+KGNCR GESC
Sbjct: 193 --WERPRKTA----------ASKYPISHDTKQYPMGS-GRSANCCTNFLKGNCRRGESC 238


>ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355491635|gb|AES72838.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1084

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
 Frame = -1

Query: 345 KGSDPPR---WSDRKSGPLR-----SSQTCKDFVVGMCRRGSQCRFLHSDNVLRDDESLD 190
           +   PPR   W     G  R     S++ C+DF VG CRRGS C FLH DN  R++    
Sbjct: 140 RSRSPPRGFRWDSGVDGRKRTRVGGSTRPCRDFAVGKCRRGSHCNFLHHDNQNRENS--- 196

Query: 189 SDISGRWKGK-QEPGHGSKYHYDKIANKFSNVYNGENDPLRTRPRGAIICRDFVKGNCRY 13
                 W+G+ +E G          A ++S  +   +  L+ R R    C +F KG+CR 
Sbjct: 197 ------WEGRPREDG----------APRYSATHESVDHSLK-RGRSNEACINFAKGSCRM 239

Query: 12  GESC 1
           G SC
Sbjct: 240 GASC 243


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