BLASTX nr result

ID: Lithospermum22_contig00026069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026069
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    56   3e-06
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    56   3e-06

>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +2

Query: 182 SFDDYYHFSTTNNRHNQEPEGIVVKTPS---KSDAVDYEADSTQQNLTQGFAATVNNSLK 352
           S  DY+ F+  +   +QEP+ I+VK+P    KS+  DYEA+ST + +   F   VN   +
Sbjct: 36  SSGDYHRFTPDSRLADQEPDAILVKSPQLKRKSEVADYEAESTDRAIGPRFXEVVNRPHQ 95

Query: 353 APVSRKGGKAQK 388
            PVS KGGK  K
Sbjct: 96  TPVSVKGGKGGK 107


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +2

Query: 182 SFDDYYHFSTTNNRHNQEPEGIVVKTPS---KSDAVDYEADSTQQNLTQGFAATVNNSLK 352
           S  DY+ F+  +   +QEP+ I+VK+P    KS+  DYEA+ST + +   F   VN+  +
Sbjct: 36  SSGDYHRFTPDSRLADQEPDAILVKSPQLKRKSEVADYEAESTDRAIGPRFXEVVNSPHQ 95

Query: 353 APVSRKGGKAQK 388
            P S KGGK  K
Sbjct: 96  TPASVKGGKGSK 107


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