BLASTX nr result
ID: Lithospermum22_contig00025983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00025983
(1528 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi... 603 e-170
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,... 578 e-162
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi... 577 e-162
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2... 576 e-162
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ... 550 e-154
>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product
[Vitis vinifera]
Length = 597
Score = 603 bits (1556), Expect = e-170
Identities = 295/477 (61%), Positives = 380/477 (79%), Gaps = 5/477 (1%)
Frame = -2
Query: 1527 FDSSPKTVLALFEWAEKQNGFECCVEVLNKVVNIVGKSRDFECVWGLVLDRIGN---KGL 1357
FD+SPK + LF WA KQ GFE + + N +++++ KSR F+ W LVLDRI L
Sbjct: 113 FDASPKPLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPEL 172
Query: 1356 VNLDTFGIVIRRYARAGMPLQSIQTYEFASRLEFISEADVEQSMFGLLLDSFCKEGHMRV 1177
V+ +TF ++IRRYARAGM L +I+T+EFA L+ I + D E S+F +LLDS CKEGH+RV
Sbjct: 173 VSSNTFAVLIRRYARAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRV 232
Query: 1176 AMDYFNKLKYQGRTFASSSRSYNILLNGWFRCRKLKQAERLWSEMKRENVKPTVVTYGTL 997
A +YF++ + ++ S R YN+LLNGWFR RKLK+AE+LW MKRENVKPTVVTYGTL
Sbjct: 233 ASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTL 292
Query: 996 VEGLCRMRRVEMAMDLISEMKSEGIEPNVIVYNPIIDALGEAGKLKEALGFMERLSVLKS 817
VEG CRMRR E A++L+ EM+ +GIEPNVIVYNPIID+L EAG+ KEA+G MER V ++
Sbjct: 293 VEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSET 352
Query: 816 GPTISTYNSLVKGFCKAGDIEGAGKILKEMISGGCIPTSTTYSYFFKYFSRTGKVQEGLN 637
GPTISTYNSLVKGFCKAGD+ GA K+LK MIS G PT TTY+YFF+YFSR GK +EG+N
Sbjct: 353 GPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMN 412
Query: 636 LYTKLMDSGYVPDLLTYHLLVKMLCEQERLDFAIQVTKEMRERGYDMDLATCTMLIHLMC 457
LYTK+++SG+ PD LTYHLL+KM+CE+ERLD A+QV+KEMR RG D+DLAT TML+HL+C
Sbjct: 413 LYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLC 472
Query: 456 RMHRFDDAFKEFEYMIRRGIVPQYLTFERLGSELKKRGLTEKLQQLYDLMGSVPHSTKLP 277
+MHR ++AF EFE MIRRGIVPQYLTFER+ + L+KRGLTE ++L D+M SVPHS+KLP
Sbjct: 473 KMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKLCDMMASVPHSSKLP 532
Query: 276 DTYRREGE--QARKSSILQKARAVSDILKTTNNPRELVKRKYSLKPPISSANRTVQD 112
+TY +G+ +ARK+SI+Q+A A+SDILKT N+PRELVKR+ S + + A++ ++D
Sbjct: 533 NTYSGDGDASRARKTSIIQRAEAMSDILKTCNDPRELVKRRSSFENTVLVADQLIED 589
>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 577
Score = 578 bits (1490), Expect = e-162
Identities = 287/475 (60%), Positives = 366/475 (77%), Gaps = 3/475 (0%)
Frame = -2
Query: 1527 FDSSPKTVLALFEWAEKQNGFECCVEVLNKVVNIVGKSRDFECVWGLVLDRIGNKGLVNL 1348
F+SSPK + +LF WA+KQ FE + N V+N +GK ++F+ W LVLDR G LV+
Sbjct: 99 FNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDRTG---LVSS 155
Query: 1347 DTFGIVIRRYARAGMPLQSIQTYEFASRLEFISEADVEQSMFGLLLDSFCKEGHMRVAMD 1168
DTF I+IRRY RAGMP +I+T+E+A L+FI + + + ++ +LLDS CKEGH+RVA +
Sbjct: 156 DTFAILIRRYTRAGMPQSAIRTFEYAISLDFICDYNCD-ALLEILLDSLCKEGHVRVAKE 214
Query: 1167 YFNKLKYQGRTFASSSRSYNILLNGWFRCRKLKQAERLWSEMKRENVKPTVVTYGTLVEG 988
YF+ K + R YNI+LNGWFR RKLK AERLW EMK+ NV P+VVTYGTLVEG
Sbjct: 215 YFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEG 274
Query: 987 LCRMRRVEMAMDLISEMKSEGIEPNVIVYNPIIDALGEAGKLKEALGFMERLSVLKSGPT 808
CRMRRVE A++L+ M+ EGIEPN +VYNPIIDAL E G+ KE G ME +SGPT
Sbjct: 275 YCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPT 334
Query: 807 ISTYNSLVKGFCKAGDIEGAGKILKEMISGGCIPTSTTYSYFFKYFSRTGKVQEGLNLYT 628
ISTYNSLVKG+CKA D GA K+LK MIS G +PT TTY+YFF++FS+ G ++EG+NLYT
Sbjct: 335 ISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYT 394
Query: 627 KLMDSGYVPDLLTYHLLVKMLCEQERLDFAIQVTKEMRERGYDMDLATCTMLIHLMCRMH 448
K+++SGY PD LT+HLL+KMLCE+ERLD A+Q++KEMR RG DMDLAT TMLIHL CRMH
Sbjct: 395 KMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMH 454
Query: 447 RFDDAFKEFEYMIRRGIVPQYLTFERLGSELKKRGLTEKLQQLYDLMGSVPHSTKLPDTY 268
RF++AF EFE MI++GIVPQYLTF+RL EL+KRG+ E+ ++L D+M SVPHST LP+TY
Sbjct: 455 RFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTY 514
Query: 267 RREGE---QARKSSILQKARAVSDILKTTNNPRELVKRKYSLKPPISSANRTVQD 112
EG+ +AR+SSILQKA A+S ILKT N+PRELVK K S + PI+SA + +++
Sbjct: 515 SVEGDALRRARRSSILQKAEAMSKILKTCNDPRELVKLKSSSQNPITSAIQLIEN 569
>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 577 bits (1487), Expect = e-162
Identities = 280/477 (58%), Positives = 368/477 (77%), Gaps = 5/477 (1%)
Frame = -2
Query: 1527 FDSSPKTVLALFEWAEKQNGFECCVEVLNKVVNIVGKSRDFECVWGLVLDRI--GNKG-L 1357
FDSSPK + +LF WA K++GF + N+++N++ KSR+F+ W L+ R+ G + L
Sbjct: 130 FDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFL 189
Query: 1356 VNLDTFGIVIRRYARAGMPLQSIQTYEFASRLEFISEADVEQSMFGLLLDSFCKEGHMRV 1177
V+++ F I+IRRYARAGM +I+TYEFA LE IS E +F +LLDS CKEGH+RV
Sbjct: 190 VSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGSE-GLFEILLDSLCKEGHVRV 248
Query: 1176 AMDYFNKLKYQGRTFASSSRSYNILLNGWFRCRKLKQAERLWSEMKRENVKPTVVTYGTL 997
A +YFN+ + G +F S R+YNIL+NGWFR RKLK A+RLW EMK+ + PTVVTYGTL
Sbjct: 249 ASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTL 308
Query: 996 VEGLCRMRRVEMAMDLISEMKSEGIEPNVIVYNPIIDALGEAGKLKEALGFMERLSVLKS 817
+EG CRMR VE+A++L+ EM+ EGIEPN IVYNPI+DALGEAG+ KEALG MER VL+
Sbjct: 309 IEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQ 368
Query: 816 GPTISTYNSLVKGFCKAGDIEGAGKILKEMISGGCIPTSTTYSYFFKYFSRTGKVQEGLN 637
GPTISTYNSLVKG+CKAGD+ GA KILK MI G PT TTY+YFF++FS+ GK++E ++
Sbjct: 369 GPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMS 428
Query: 636 LYTKLMDSGYVPDLLTYHLLVKMLCEQERLDFAIQVTKEMRERGYDMDLATCTMLIHLMC 457
LY K+++SGY PD LTYHLL+KMLCE+ERL+ A+QV EM+ RG+DMDLAT TML+HL+C
Sbjct: 429 LYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLC 488
Query: 456 RMHRFDDAFKEFEYMIRRGIVPQYLTFERLGSELKKRGLTEKLQQLYDLMGSVPHSTKLP 277
+MH+F++AF EFE+MI RGIVPQYLTF RL E KRGLT+ +L ++M SVPHS KLP
Sbjct: 489 KMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLP 548
Query: 276 DTYRR--EGEQARKSSILQKARAVSDILKTTNNPRELVKRKYSLKPPISSANRTVQD 112
DTY + + +AR++SI++KA A+S++LK +PRELVKR+ + + SAN+ + D
Sbjct: 549 DTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSEDAVFSANKLIDD 605
>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 576 bits (1485), Expect = e-162
Identities = 290/478 (60%), Positives = 364/478 (76%), Gaps = 6/478 (1%)
Frame = -2
Query: 1527 FDSSPKTVLALFEWAEKQNGFECCVEVLNKVVNIVGKSRDFECVWGLVLDRIG-NKG--L 1357
FDSSPK + ++F WAEK+ GF+ + N +VN +GK+R+F W L+LDRIG N+G L
Sbjct: 123 FDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDL 182
Query: 1356 VNLDTFGIVIRRYARAGMPLQSIQTYEFASRLEFISEADVEQSMFGLLLDSFCKEGHMRV 1177
V+ DTF I+IRRY RAGM +I+T+E+AS L+ I ++ S+F +LLDS CKEGH+RV
Sbjct: 183 VSSDTFAILIRRYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRV 242
Query: 1176 AMDYFNKLKYQGRTFASSSRSYNILLNGWFRCRKLKQAERLWSEMKRENVKPTVVTYGTL 997
A DYF++ + + S R YNILLNGWFR RKLK AERLW EMK++NVKP+VVTYGTL
Sbjct: 243 ATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTL 302
Query: 996 VEGLCRMRRVEMAMDLISEMKSEGIEPNVIVYNPIIDALGEAGKLKEALGFMERLSVLKS 817
VEG RMRRVE A++L+ EMK EGI+ N IVYNPIIDAL EAG+ KE LG ME + +
Sbjct: 303 VEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEE 362
Query: 816 GPTISTYNSLVKGFCKAGDIEGAGKILKEMISGGCIPTSTTYSYFFKYFSRTGKVQEGLN 637
GPTISTYNSLVKG+CKAGD+ GA KILK MIS PT TTY+YFF++FS+ K++EG+N
Sbjct: 363 GPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMN 422
Query: 636 LYTKLMDSGYVPDLLTYHLLVKMLCEQERLDFAIQVTKEMRERGYDMDLATCTMLIHLMC 457
LYTK+++SGY PD LTYHLL+KMLCE+ERLD A+Q++KEMR RG DMDLAT TM HL+C
Sbjct: 423 LYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLC 482
Query: 456 RMHRFDDAFKEFEYMIRRGIVPQYLTFERLGSELKKRGLTEKLQQLYDLMGSVPHSTKLP 277
+M RF++AF EFE M+RRGIVPQYLTF RL E +K+GLTE ++L LM SV HS LP
Sbjct: 483 KMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNLP 542
Query: 276 DTY---RREGEQARKSSILQKARAVSDILKTTNNPRELVKRKYSLKPPISSANRTVQD 112
+TY R AR+ SILQKA +S+ILKT N+PRELVK + S + P SSAN+ ++D
Sbjct: 543 NTYNVDRDASRHARRKSILQKAGVMSEILKTCNDPRELVKHRSSSQNPESSANQLIED 600
>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 587
Score = 550 bits (1417), Expect = e-154
Identities = 277/475 (58%), Positives = 359/475 (75%), Gaps = 7/475 (1%)
Frame = -2
Query: 1527 FDSSPKTVLALFEWAEKQNGFECCVEVLNKVVNIVGKSRDFECVWGLVLDRI-----GNK 1363
F SSPK + +L+ WA Q GF+ + + V+N + K ++F+ W LVLDRI ++
Sbjct: 114 FASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDE 173
Query: 1362 GLVNLDTFGIVIRRYARAGMPLQSIQTYEFASRLEFISEADVEQSMFGLLLDSFCKEGHM 1183
LV++ TF I+IRRYARAGM +I+T+EFA + I ++ E S+F +L+DS CKEG
Sbjct: 174 KLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSA 233
Query: 1182 RVAMDYFNKLKYQGRTFASSSRSYNILLNGWFRCRKLKQAERLWSEMKRENVKPTVVTYG 1003
R A +Y + K + S R YNI+LNGWFR RKLK AERLW EMK ENV+P+VVTYG
Sbjct: 234 REASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYG 293
Query: 1002 TLVEGLCRMRRVEMAMDLISEMKSEGIEPNVIVYNPIIDALGEAGKLKEALGFMERLSVL 823
TLVEG CRMRRVE A++++ EM EGI+PN IVYNPIIDAL EAG+ KEALG MER VL
Sbjct: 294 TLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVL 353
Query: 822 KSGPTISTYNSLVKGFCKAGDIEGAGKILKEMISGGCIPTSTTYSYFFKYFSRTGKVQEG 643
+ GPT+STYNSLVKGFCKAGDIEGA KILK+MIS G +P TTY+YFF+YFSR GKV EG
Sbjct: 354 QIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEG 413
Query: 642 LNLYTKLMDSGYVPDLLTYHLLVKMLCEQERLDFAIQVTKEMRERGYDMDLATCTMLIHL 463
+NLYTK+++SG+ PD LTYHL++KMLCE+E+L+ A+QV+ EMR +GYDMDLAT TML HL
Sbjct: 414 MNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHL 473
Query: 462 MCRMHRFDDAFKEFEYMIRRGIVPQYLTFERLGSELKKRGLTEKLQQLYDLMGSVPHSTK 283
+C+MH+ ++AF EFE MIRRGI+PQYLTF++L ELKK+G+ E ++L LM SVP+S K
Sbjct: 474 LCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKLCHLMSSVPYSDK 533
Query: 282 LPDTYR--REGEQARKSSILQKARAVSDILKTTNNPRELVKRKYSLKPPISSANR 124
LP+TY R+ AR+ SI+QKA+AVS++LK +P+EL K + S + +SS N+
Sbjct: 534 LPNTYGEVRDDAHARRKSIIQKAKAVSELLK---DPKELDKFRSSSEDAVSSLNK 585