BLASTX nr result

ID: Lithospermum22_contig00025940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025940
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
emb|CBH19892.1| cell cycle switch 52B [Solanum lycopersicum var....   151   6e-35
ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communi...   144   1e-32
ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vi...   142   3e-32

>ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|222851924|gb|EEE89471.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  156 bits (395), Expect = 1e-36
 Identities = 96/162 (59%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
 Frame = -2

Query: 487 MDPNQRRKSGIILPQTMSETSLRLESFPSTNSSSFRAMTNVPSPIAMSPRALSNLASSPI 308
           MD   RRKSG+ LP  M+ETSLRLE+F S  SSSFRA+T V SP     RA+S+L+S   
Sbjct: 1   MDSTPRRKSGLNLPSGMNETSLRLETFSS--SSSFRAVTCVSSP-----RAISSLSSP-- 51

Query: 307 KKPGACSDRFIPCRSSSRLHTFGLIDKPSPKKEGGGGASEAYTRLLRIELF--XXXXXXX 134
            K  +CSDRFIPCRSSSRLHTFGL++K SP KEGG   +EAY RLL+ ELF         
Sbjct: 52  SKTSSCSDRFIPCRSSSRLHTFGLVEKGSPVKEGG---NEAYARLLKSELFGSDFGSFSS 108

Query: 133 XXXXXXXXXXPNKNMLRFRTEHSGCNSPFSPSILGQDSGSHS 8
                     PNKNMLRF+T+HSG NSPFSPSILG DSG  S
Sbjct: 109 PAGGQGGLSSPNKNMLRFKTDHSGPNSPFSPSILGHDSGISS 150


>emb|CBH19892.1| cell cycle switch 52B [Solanum lycopersicum var. cerasiforme]
          Length = 499

 Score =  151 bits (381), Expect = 6e-35
 Identities = 92/169 (54%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
 Frame = -2

Query: 487 MDP-NQRRKSGIILPQTMSETSLRLESFPSTNSSSFRAMTNVPSPIA-MSPRALSNLASS 314
           M+P  QRRKSGI LP TMSETSLRL++F S   S  R      SP++  SPR +SNL+SS
Sbjct: 1   MEPITQRRKSGINLPSTMSETSLRLDAFSSPPRSK-RTTNLASSPMSNRSPRTISNLSSS 59

Query: 313 PIKKPGACSDRFIPCRSSSRLHTFGLIDKPSPKKEGGGGASEAYTRLLRIELF-----XX 149
           P  K  +CSDRFIPCRSSSRLHTFGL++K SP KEGGGG ++AY+RLL+ ELF       
Sbjct: 60  PSSKSASCSDRFIPCRSSSRLHTFGLVEKASPVKEGGGGNNDAYSRLLKSELFGADFSCF 119

Query: 148 XXXXXXXXXXXXXXXPNKNMLRFRTEHSGCNSPFSPSILGQDSGSHSSE 2
                          P+KNMLRF+TE+SG   P SPS+LG    S S+E
Sbjct: 120 SSPAGTKGCANSPMSPSKNMLRFKTENSG---PNSPSVLGHTDTSLSNE 165


>ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|222864257|gb|EEF01388.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  150 bits (380), Expect = 8e-35
 Identities = 94/162 (58%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
 Frame = -2

Query: 487 MDPNQRRKSGIILPQTMSETSLRLESFPSTNSSSFRAMTNVPSPIAMSPRALSNLASSPI 308
           MD   RRKSG+ LP  M+ETSLRLE+F S  SSSFRA+T V SP     RA+S+L+S   
Sbjct: 1   MDSTPRRKSGLNLPSGMNETSLRLETFSS--SSSFRAVTCVSSP-----RAISSLSSP-- 51

Query: 307 KKPGACSDRFIPCRSSSRLHTFGLIDKPSPKKEGGGGASEAYTRLLRIELF--XXXXXXX 134
            K  +CSDRFIPCRSSSRL TFGLI+K SP KEGG   +EAY RLL+ ELF         
Sbjct: 52  SKTSSCSDRFIPCRSSSRLQTFGLIEKGSPVKEGG---NEAYARLLKSELFGSDFGSFSS 108

Query: 133 XXXXXXXXXXPNKNMLRFRTEHSGCNSPFSPSILGQDSGSHS 8
                     P+KNMLRF+T+HSG NSP+SPSILG DSG  S
Sbjct: 109 PAGGQGGLGSPSKNMLRFKTDHSGPNSPYSPSILGHDSGISS 150


>ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communis]
           gi|223528800|gb|EEF30806.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 493

 Score =  144 bits (362), Expect = 1e-32
 Identities = 90/162 (55%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
 Frame = -2

Query: 472 RRKSGIILPQTMSETSLRLESFPSTNSSSFRAMTNVPSPIAMSPRALSNLASSPIKKPGA 293
           RRKSG+ LP  M++TSLRL++FP+ NS  FRA       ++ SPRA+S+L SSP  K   
Sbjct: 8   RRKSGLNLPSGMNQTSLRLDTFPA-NSGGFRAS------VSSSPRAISSL-SSPSSKSST 59

Query: 292 CSDRFIPCRSSSRLHTFGLIDKP-SPKKEGGGGASEAYTRLLRIELF------XXXXXXX 134
           CSDRFIPCRSSSRLHTFGL++K  SP KEGG   +EAY+RLL+ ELF             
Sbjct: 60  CSDRFIPCRSSSRLHTFGLLEKKGSPVKEGG---NEAYSRLLKSELFGSDFLSCSPAGGG 116

Query: 133 XXXXXXXXXXPNKNMLRFRTEHSGCNSPFSPSILGQDSGSHS 8
                     P+KNMLRFRT+ SG NSP+SPSILGQDSG  S
Sbjct: 117 GGQGGSALSSPSKNMLRFRTDLSGPNSPYSPSILGQDSGISS 158


>ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vinifera]
           gi|296086214|emb|CBI31655.3| unnamed protein product
           [Vitis vinifera]
          Length = 471

 Score =  142 bits (358), Expect = 3e-32
 Identities = 87/160 (54%), Positives = 102/160 (63%)
 Frame = -2

Query: 487 MDPNQRRKSGIILPQTMSETSLRLESFPSTNSSSFRAMTNVPSPIAMSPRALSNLASSPI 308
           MD ++RRKSG+ LP  MSETSLRLE+F    S S+RA++N+ SP                
Sbjct: 1   MDSSERRKSGLNLPAGMSETSLRLETF----SGSYRAISNLSSP---------------- 40

Query: 307 KKPGACSDRFIPCRSSSRLHTFGLIDKPSPKKEGGGGASEAYTRLLRIELFXXXXXXXXX 128
            K  +CSDRFIPCRSSSRLHTFGLI+K SP KEGG   +EAY RLL+ ELF         
Sbjct: 41  SKATSCSDRFIPCRSSSRLHTFGLIEKASPVKEGG---NEAYFRLLKQELF-GSDFGSSP 96

Query: 127 XXXXXXXXPNKNMLRFRTEHSGCNSPFSPSILGQDSGSHS 8
                   P+KNMLRF+T+HSG NSPFSPSI G DSG  S
Sbjct: 97  AGQGSPMSPSKNMLRFKTDHSGPNSPFSPSIFGPDSGFSS 136


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