BLASTX nr result

ID: Lithospermum22_contig00025876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025876
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533352.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002310378.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|NP_001235891.1| uncharacterized protein LOC100305729 [Glycin...    57   1e-06
ref|XP_002331647.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002533352.1| conserved hypothetical protein [Ricinus communis]
           gi|223526817|gb|EEF29037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/117 (38%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
 Frame = -3

Query: 408 MEGIIPLVLKTFKKNRTRSHYEYLSSGVASAAHHQRYNISDFYQDDDPVTIKSNEEI--- 238
           MEG++PLV K  K+NRTR  YE LSSG A A     YN +DFY  D   T      I   
Sbjct: 1   MEGLLPLVYKAIKRNRTRRQYECLSSGAAFA-----YNPADFYISDAETTYTKPSSIIME 55

Query: 237 -----------------KVRNLQKSHQSFHYESSDSANKKELVRFRSHRRMFSCMPG 118
                             V +L  +  S    +  S  +K+LVRFRS +RMFSC+ G
Sbjct: 56  KNNAGTGRSKLHRRSYSSVEDLSVTGSSRRRTAGASPPRKQLVRFRS-QRMFSCVTG 111


>ref|XP_002310378.1| predicted protein [Populus trichocarpa] gi|222853281|gb|EEE90828.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
 Frame = -3

Query: 408 MEGIIPLVLKTFKKNRTRSHYEYLSSGVASAAHHQRYNISDFYQDDDP---VTIKSNEEI 238
           MEG+IPLV K F K +TRS YE LSSG A     + YNISDFY  + P   + ++ + E 
Sbjct: 1   MEGLIPLVYKAFMKKKTRSQYECLSSGAA-----RGYNISDFYVHEAPKSELHLEPSMEK 55

Query: 237 KVRNLQKSHQSFHYESSD----------------SANKKELVRFRSHR 142
           K    +K HQ +     D                S   K LVRFRS R
Sbjct: 56  KTYQ-KKGHQRYFSVHGDFSGGFSSLADRSTAAASPQTKRLVRFRSQR 102


>ref|NP_001235891.1| uncharacterized protein LOC100305729 [Glycine max]
           gi|255626451|gb|ACU13570.1| unknown [Glycine max]
          Length = 122

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 29/126 (23%)
 Frame = -3

Query: 408 MEGIIPLVLKTFKKNRTRSHYEYLSSGVASAAHHQRYNISDFY----------------- 280
           MEG++PLV K  KK +TR  Y+ LSSG   AA     N+++FY                 
Sbjct: 1   MEGLLPLVYKAIKKRKTRRQYQCLSSG---AALSYNMNVAEFYPQTHDHGHGYNYMQEPS 57

Query: 279 ---------QDDDPVTIKSNEEIKVRNLQKSHQSFHYE---SSDSANKKELVRFRSHRRM 136
                     DDD   I       VR       S H +   ++DS + K+LVRFRS +++
Sbjct: 58  TSMQKVVDHDDDDTENIGYLRYNSVREFSNGFSSPHQQRTCAADSPDSKQLVRFRS-QKL 116

Query: 135 FSCMPG 118
           FSC+ G
Sbjct: 117 FSCLAG 122


>ref|XP_002331647.1| predicted protein [Populus trichocarpa] gi|222874043|gb|EEF11174.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
 Frame = -3

Query: 408 MEGIIPLVLKTFKKNRTRSHYEYLSSGVASAAHHQRYNISDFYQDD--------DPVTIK 253
           MEG+IPLV K F+KN+TR  YE LS G A +     YNISDFY  +         P    
Sbjct: 1   MEGLIPLVCKAFRKNKTRRQYECLSVGAALS-----YNISDFYTHEAPKSELHFQPSMEN 55

Query: 252 SNEEIKV-RNLQKSHQSF---------HYESSDSANKKELVRFRSHR 142
           +N + KV R     H+ F            ++ S   K+L RFRS R
Sbjct: 56  TNSQKKVHRRFWSVHEDFSGGFSSPAVRSTTAASPQTKQLARFRSQR 102


Top