BLASTX nr result

ID: Lithospermum22_contig00025855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025855
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li...   219   3e-55
emb|CBI33775.3| unnamed protein product [Vitis vinifera]              219   3e-55
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|...   211   1e-52
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li...   204   1e-50
ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrat...   194   1e-47

>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
          Length = 389

 Score =  219 bits (559), Expect = 3e-55
 Identities = 98/169 (57%), Positives = 133/169 (78%)
 Frame = -3

Query: 507 MENKLVQVTKEVLVQIVKLVQTRGMSGSRGNWKEFLNFHDKKIGASLCDPARRTVDDLIA 328
           M+N LV   KEVLV++VKL Q RG+ GS+G+WK+FL+ +D+K+G SL DP+RR VD L++
Sbjct: 1   MDNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVS 60

Query: 327 FLKTFEQEDELKFIEKVLECYSIRDAMGQFHKDSPDTETPEQRLVRATVEHPRYPIEYSF 148
           FLKTF +E++LKF  K+L+CY+ R  + +F   S   E+PEQRL+R T+EHP+YP++YSF
Sbjct: 61  FLKTFSKEEDLKFFAKILQCYANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSF 120

Query: 147 PSYEEGWVVMKRSKKLKYLKSTVMVAIDCEMVLCEDGTEALARVCAVDR 1
           PS+EEGW+V K  +K K+ +S  M+A+DCEMVLCEDGTE L RVC VDR
Sbjct: 121 PSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDR 169


>emb|CBI33775.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  219 bits (559), Expect = 3e-55
 Identities = 98/169 (57%), Positives = 133/169 (78%)
 Frame = -3

Query: 507 MENKLVQVTKEVLVQIVKLVQTRGMSGSRGNWKEFLNFHDKKIGASLCDPARRTVDDLIA 328
           M+N LV   KEVLV++VKL Q RG+ GS+G+WK+FL+ +D+K+G SL DP+RR VD L++
Sbjct: 1   MDNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVS 60

Query: 327 FLKTFEQEDELKFIEKVLECYSIRDAMGQFHKDSPDTETPEQRLVRATVEHPRYPIEYSF 148
           FLKTF +E++LKF  K+L+CY+ R  + +F   S   E+PEQRL+R T+EHP+YP++YSF
Sbjct: 61  FLKTFSKEEDLKFFAKILQCYANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSF 120

Query: 147 PSYEEGWVVMKRSKKLKYLKSTVMVAIDCEMVLCEDGTEALARVCAVDR 1
           PS+EEGW+V K  +K K+ +S  M+A+DCEMVLCEDGTE L RVC VDR
Sbjct: 121 PSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDR 169


>ref|XP_002524917.1| exonuclease, putative [Ricinus communis]
           gi|223535752|gb|EEF37414.1| exonuclease, putative
           [Ricinus communis]
          Length = 504

 Score =  211 bits (537), Expect = 1e-52
 Identities = 99/169 (58%), Positives = 130/169 (76%)
 Frame = -3

Query: 507 MENKLVQVTKEVLVQIVKLVQTRGMSGSRGNWKEFLNFHDKKIGASLCDPARRTVDDLIA 328
           MENKL  V +++LV+IVKL Q +G  G++G WKEFLN +DKKIG+SL DPA+RT   L++
Sbjct: 1   MENKLATVPEKILVEIVKLAQKQGRKGTQGGWKEFLNVYDKKIGSSLSDPAKRTRPTLVS 60

Query: 327 FLKTFEQEDELKFIEKVLECYSIRDAMGQFHKDSPDTETPEQRLVRATVEHPRYPIEYSF 148
           FL+TF  + +LKF++ VL  +S R+ + Q  ++SPD E+PEQRLVR TVEHP Y  +Y+F
Sbjct: 61  FLQTFTHKSDLKFVDYVLRLHSNREVLDQIRQESPDNESPEQRLVRLTVEHPFYLSKYAF 120

Query: 147 PSYEEGWVVMKRSKKLKYLKSTVMVAIDCEMVLCEDGTEALARVCAVDR 1
           PSY++GWVV K  KK K + +  ++AIDCEMVLCEDGTEAL RVC VDR
Sbjct: 121 PSYDQGWVVTKLPKKSKLMSTDSIIAIDCEMVLCEDGTEALVRVCVVDR 169


>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
           gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
           degrading nuclease 3-like [Cucumis sativus]
          Length = 524

 Score =  204 bits (520), Expect = 1e-50
 Identities = 97/169 (57%), Positives = 130/169 (76%)
 Frame = -3

Query: 507 MENKLVQVTKEVLVQIVKLVQTRGMSGSRGNWKEFLNFHDKKIGASLCDPARRTVDDLIA 328
           ME+K+    K+VLV++V+L Q RGM+GS G+WKEFLN  D K GAS+ DP++R  D LIA
Sbjct: 1   MEDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIA 60

Query: 327 FLKTFEQEDELKFIEKVLECYSIRDAMGQFHKDSPDTETPEQRLVRATVEHPRYPIEYSF 148
           FLKTF++E++L F++KV +C   R+ + Q  + +P+ E+PEQ+LVR T+EHP+YP+EYSF
Sbjct: 61  FLKTFDKEEDLMFLDKVFQCNEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYSF 120

Query: 147 PSYEEGWVVMKRSKKLKYLKSTVMVAIDCEMVLCEDGTEALARVCAVDR 1
           PSY++ WVV K S+K K   S ++ AIDCEMVLCEDGTE L RVC VDR
Sbjct: 121 PSYDKEWVVTKFSQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDR 169


>ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrata]
           gi|297310851|gb|EFH41275.1| exonuclease [Arabidopsis
           lyrata subsp. lyrata]
          Length = 776

 Score =  194 bits (494), Expect = 1e-47
 Identities = 95/170 (55%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
 Frame = -3

Query: 507 MENKLVQVTKEVLVQIVKLVQTRGMSGSRGNWKEFLNFHDKKIGASLCDPARRTVDDLIA 328
           ME+KL    K+VLV +VKLVQ RG+ G  G WKEFLN +DKK G+SL DP+RR+ D L+A
Sbjct: 1   MEHKLATAEKKVLVDLVKLVQKRGLEGENGGWKEFLNVYDKKFGSSLSDPSRRSNDVLVA 60

Query: 327 FLKTFEQEDELKFIEKVLECYSIRDAMGQFHKDSPDTETPEQRLVRATVEHPRYPIEYSF 148
           FL TF+++++L+ I +V++C + R+ + +F +++PD ETPEQRLVR T+ H +YP  Y F
Sbjct: 61  FLLTFKKKEDLQLIARVMQCGANRELIEKFKQETPDKETPEQRLVRLTITHFQYPTNYLF 120

Query: 147 PSYEEGWVVMK-RSKKLKYLKSTVMVAIDCEMVLCEDGTEALARVCAVDR 1
           PSY E W V +   KK K +KST M+AIDCEMV C+DGTEA+ RV AVDR
Sbjct: 121 PSYAEDWFVTELGKKKSKVMKSTRMLAIDCEMVTCDDGTEAVVRVGAVDR 170


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