BLASTX nr result

ID: Lithospermum22_contig00025812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025812
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   146   2e-33
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   146   2e-33
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   142   3e-32
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   142   4e-32
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   139   2e-31

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/151 (45%), Positives = 88/151 (58%)
 Frame = +2

Query: 8   PNFTMQCFLLPILICNEINSTIAKYW*DSTKNKRTIHWAAWATLCKEKADGGLGFRDSYD 187
           P + M CF LP  +C+EI S +  +W    +  R IHW +W  LCK K  GG+GFR    
Sbjct: 50  PTYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQX 109

Query: 188 FNVALLCKQAWRLVTEPNSPIVRIFQACYYPHASF*TASLGPKPSFTWRSILTARDLLIK 367
           FN ALL KQ WRLV  P S + R+F+A Y+P  SF  A +G  PSFTWRSI+ +R LL  
Sbjct: 110 FNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNA 169

Query: 368 DKKWTVGNGKDIQVWNFRWLTHTTTNKPITP 460
             +W VGNG  I V   +W+    + K I P
Sbjct: 170 GLRWRVGNGASISVKYDKWVPRPHSFKVILP 200


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/151 (45%), Positives = 94/151 (62%)
 Frame = +2

Query: 8   PNFTMQCFLLPILICNEINSTIAKYW*DSTKNKRTIHWAAWATLCKEKADGGLGFRDSYD 187
           P + MQ  LLP  +C +I S +  ++ DS    R+I W +W  +CK+K DGGLGFR   D
Sbjct: 269 PTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXD 328

Query: 188 FNVALLCKQAWRLVTEPNSPIVRIFQACYYPHASF*TASLGPKPSFTWRSILTARDLLIK 367
           FN+ALL KQ WR +  P+S + RIFQA Y+ ++SF  A LG  PS+ WRSIL A+ LL +
Sbjct: 329 FNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKR 388

Query: 368 DKKWTVGNGKDIQVWNFRWLTHTTTNKPITP 460
              W++ +G  +QVW   WL  ++    ITP
Sbjct: 389 GCYWSIASGTKVQVWGDSWLPDSSNRLIITP 419


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/152 (42%), Positives = 93/152 (61%)
 Frame = +2

Query: 8   PNFTMQCFLLPILICNEINSTIAKYW*DSTKNKRTIHWAAWATLCKEKADGGLGFRDSYD 187
           P + M CF L   +C+E++S I +YW         IHW +W  L + K  GGLGFRD + 
Sbjct: 382 PTYAMSCFDLTKGLCDELSSIIGRYWWSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHL 441

Query: 188 FNVALLCKQAWRLVTEPNSPIVRIFQACYYPHASF*TASLGPKPSFTWRSILTARDLLIK 367
           FN+A+L +QAWRL+T P+S   ++ +A Y+PH+     S  P+ S+TWRSIL    LL +
Sbjct: 442 FNLAMLSRQAWRLLTNPDSLCGQVLKARYFPHSDILHCSPRPRISYTWRSILKGVALLKE 501

Query: 368 DKKWTVGNGKDIQVWNFRWLTHTTTNKPITPK 463
              W +GNGK++++W   W+    T KPITP+
Sbjct: 502 GIIWRIGNGKNVKIWEHPWIPKGITRKPITPR 533


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/151 (45%), Positives = 86/151 (56%)
 Frame = +2

Query: 8   PNFTMQCFLLPILICNEINSTIAKYW*DSTKNKRTIHWAAWATLCKEKADGGLGFRDSYD 187
           P + M CF LP  +C EI S +  +W    +  R IHW +W  LCK K  GG+GFR    
Sbjct: 50  PTYIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQH 109

Query: 188 FNVALLCKQAWRLVTEPNSPIVRIFQACYYPHASF*TASLGPKPSFTWRSILTARDLLIK 367
           FN ALL KQ WRL   P S + R+F+A Y+P  SF  A +G  PSFTWRSI+ +R LL  
Sbjct: 110 FNSALLAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRRLLNA 169

Query: 368 DKKWTVGNGKDIQVWNFRWLTHTTTNKPITP 460
             +W VGNG  I V   +W+    + K I P
Sbjct: 170 GLRWRVGNGASISVKYDKWVPRPHSFKVILP 200


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/161 (42%), Positives = 96/161 (59%)
 Frame = +2

Query: 8    PNFTMQCFLLPILICNEINSTIAKYW*DSTKNKRTIHWAAWATLCKEKADGGLGFRDSYD 187
            P + MQ  LLP  +C +I S +  ++ DS    R+I W +W  +CK+K DGGLGFR   D
Sbjct: 1356 PTYVMQLLLLPKDLCRDIESMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRKLED 1415

Query: 188  FNVALLCKQAWRLVTEPNSPIVRIFQACYYPHASF*TASLGPKPSFTWRSILTARDLLIK 367
            FN+ALL KQ  R +   +S +  IFQA Y+ ++SF  A LG  PS+ WRSIL A+DLL  
Sbjct: 1416 FNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKM 1475

Query: 368  DKKWTVGNGKDIQVWNFRWLTHTTTNKPITPKNDDYPNLLV 490
               W++ +G  +QVW   WL +++    ITP   D+  + V
Sbjct: 1476 GCYWSIASGTKVQVWGDSWLPNSSNRLIITPHVADFDGIKV 1516


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