BLASTX nr result

ID: Lithospermum22_contig00025733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025733
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517938.1| conserved hypothetical protein [Ricinus comm...   254   1e-65
ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261...   253   3e-65
ref|XP_002884219.1| hypothetical protein ARALYDRAFT_480909 [Arab...   246   3e-63
ref|NP_179667.2| Tetraspanin family protein [Arabidopsis thalian...   245   9e-63
ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|2...   242   6e-62

>ref|XP_002517938.1| conserved hypothetical protein [Ricinus communis]
           gi|223542920|gb|EEF44456.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  254 bits (649), Expect = 1e-65
 Identities = 118/214 (55%), Positives = 156/214 (72%), Gaps = 5/214 (2%)
 Frame = -2

Query: 634 MARLARSCMQSLLKLVNSGMTMVGIAMILYALWMFRGWQKHLAPH-----IDVPLPWFIY 470
           M RL RSCMQS+LKL+NS + MVG+ MILYA+W+ R WQ+ +         D P PWFIY
Sbjct: 1   MVRLMRSCMQSILKLLNSVIGMVGLGMILYAVWLIRVWQREMGDFPFEDDSDNPAPWFIY 60

Query: 469 TFLGIGITMCIISCSGHIAAETANGCCLYIYMLFLFLIVMIEAAVTTDVFLNHRWEEDFP 290
           TFLG+G+T+C+I+C GH+AAETANGCCLY+YMLF+F++ M+EA V+ DVFLN  WE+DFP
Sbjct: 61  TFLGLGVTLCVITCVGHVAAETANGCCLYLYMLFVFVLFMLEAGVSADVFLNRDWEKDFP 120

Query: 289 EDQTGNLDHLKHFIKDNFDICKWIGLSVVAVQGLSLLFAMVLKALGPHPEKYYESXXXXX 110
           +D TG+ +  K FI+ NF+ICKW+GLS+V+VQGLS L A++LKALGPH  +Y +S     
Sbjct: 121 KDPTGSFNQFKDFIRSNFEICKWMGLSIVSVQGLSFLLALILKALGPH--QYCDSDDEFT 178

Query: 109 XXXXXXXXXXXXXPNYALGDPVYGSRNNSWNIRV 8
                        P Y +G PV GSRN++W+IR+
Sbjct: 179 PDRVPLLNNAAIPPPYVVGSPVVGSRNDAWSIRI 212


>ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261981 [Vitis vinifera]
           gi|297739115|emb|CBI28766.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score =  253 bits (646), Expect = 3e-65
 Identities = 118/209 (56%), Positives = 152/209 (72%)
 Frame = -2

Query: 634 MARLARSCMQSLLKLVNSGMTMVGIAMILYALWMFRGWQKHLAPHIDVPLPWFIYTFLGI 455
           M R+ RSCMQS+LKLVNS + MVGIAM++YALWM R W +H+  + D   PWFIYTFLG+
Sbjct: 1   MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDY-DSRAPWFIYTFLGL 59

Query: 454 GITMCIISCSGHIAAETANGCCLYIYMLFLFLIVMIEAAVTTDVFLNHRWEEDFPEDQTG 275
           G T+C+ +C GH AAETANGCCLY+YM+++F ++++EA VT DVFLNH WEEDFPED TG
Sbjct: 60  GATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPEDPTG 119

Query: 274 NLDHLKHFIKDNFDICKWIGLSVVAVQGLSLLFAMVLKALGPHPEKYYESXXXXXXXXXX 95
           +    K+F++ NF+ICKWIGLS++ VQGLS+L AMVLKALGPH  +YY+S          
Sbjct: 120 SFHEFKNFVRSNFEICKWIGLSILFVQGLSILLAMVLKALGPH--QYYDSDDEYAPTRAP 177

Query: 94  XXXXXXXXPNYALGDPVYGSRNNSWNIRV 8
                   P Y  GDP  GSR +++  R+
Sbjct: 178 LLRNAVHPPPYVAGDPFSGSRTDAYGKRI 206


>ref|XP_002884219.1| hypothetical protein ARALYDRAFT_480909 [Arabidopsis lyrata subsp.
           lyrata] gi|297330059|gb|EFH60478.1| hypothetical protein
           ARALYDRAFT_480909 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  246 bits (629), Expect = 3e-63
 Identities = 111/213 (52%), Positives = 150/213 (70%), Gaps = 4/213 (1%)
 Frame = -2

Query: 634 MARLARSCMQSLLKLVNSGMTMVGIAMILYALWMFRGWQKHLA----PHIDVPLPWFIYT 467
           M R+ RSC+QS+LKLVNS + MVGIAMILYA+W+ R WQ+ +        D P+PWFIY+
Sbjct: 1   MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYS 60

Query: 466 FLGIGITMCIISCSGHIAAETANGCCLYIYMLFLFLIVMIEAAVTTDVFLNHRWEEDFPE 287
           FLG+G  +C+++C+GHIAAET NGCCLY+YM F+ L+VM+E  V  D+FLN  W++DFPE
Sbjct: 61  FLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLVMVEGGVVADIFLNRDWKKDFPE 120

Query: 286 DQTGNLDHLKHFIKDNFDICKWIGLSVVAVQGLSLLFAMVLKALGPHPEKYYESXXXXXX 107
           D +G       FI+ NF ICKWIGLS+V VQGLS+L AM+LKALGPHP ++Y+S      
Sbjct: 121 DPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLLAMLLKALGPHPYRHYDSDDEYNV 180

Query: 106 XXXXXXXXXXXXPNYALGDPVYGSRNNSWNIRV 8
                       P Y +G+P+YG++  +W +R+
Sbjct: 181 STVALLQDGRQLPPYVVGEPMYGAKPGAWTVRI 213


>ref|NP_179667.2| Tetraspanin family protein [Arabidopsis thaliana]
           gi|75163928|sp|Q940P5.1|TET19_ARATH RecName:
           Full=Tetraspanin-19 gi|18087599|gb|AAL58930.1|AF462842_1
           At2g20740/F5H14.29 [Arabidopsis thaliana]
           gi|15809899|gb|AAL06877.1| At2g20740/F5H14.29
           [Arabidopsis thaliana] gi|20453255|gb|AAM19866.1|
           At2g20740/F5H14.29 [Arabidopsis thaliana]
           gi|51969248|dbj|BAD43316.1| hypothetical protein
           [Arabidopsis thaliana] gi|51970314|dbj|BAD43849.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330251971|gb|AEC07065.1| Tetraspanin family protein
           [Arabidopsis thaliana]
          Length = 221

 Score =  245 bits (625), Expect = 9e-63
 Identities = 110/213 (51%), Positives = 149/213 (69%), Gaps = 4/213 (1%)
 Frame = -2

Query: 634 MARLARSCMQSLLKLVNSGMTMVGIAMILYALWMFRGWQKHLA----PHIDVPLPWFIYT 467
           M R+ RSC+QS+LKLVNS + MVGIAMILYA+W+ R WQ+ +        D P+PWFIY+
Sbjct: 1   MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYS 60

Query: 466 FLGIGITMCIISCSGHIAAETANGCCLYIYMLFLFLIVMIEAAVTTDVFLNHRWEEDFPE 287
           FLG+G  +C+++C+GHIAAET NGCCLY+YM F+ L+ M+E  V  D+FLN  W++DFPE
Sbjct: 61  FLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPE 120

Query: 286 DQTGNLDHLKHFIKDNFDICKWIGLSVVAVQGLSLLFAMVLKALGPHPEKYYESXXXXXX 107
           D +G       FI+ NF ICKWIGLS+V VQGLS+L AM+LKALGPHP ++Y+S      
Sbjct: 121 DPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNV 180

Query: 106 XXXXXXXXXXXXPNYALGDPVYGSRNNSWNIRV 8
                       P Y +G+P+YG++  +W +R+
Sbjct: 181 STVALLQDARQPPPYVVGEPMYGAKPGAWTVRL 213


>ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|222857734|gb|EEE95281.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  242 bits (618), Expect = 6e-62
 Identities = 115/214 (53%), Positives = 152/214 (71%), Gaps = 5/214 (2%)
 Frame = -2

Query: 634 MARLARSCMQSLLKLVNSGMTMVGIAMILYALWMFRGWQKHLA-----PHIDVPLPWFIY 470
           M  + RSC+QS+LKLVN  + MVGIAM+LY++W+ R W++ +         D   PWFIY
Sbjct: 1   MVSVMRSCIQSILKLVNCLIGMVGIAMVLYSIWLIRVWEREMGGFPFFEDDDDFTPWFIY 60

Query: 469 TFLGIGITMCIISCSGHIAAETANGCCLYIYMLFLFLIVMIEAAVTTDVFLNHRWEEDFP 290
           TFLG+G+ + +I+C GHIAAETANG CLY+YMLF+FL++M+EA VT DV LN  WEEDFP
Sbjct: 61  TFLGLGVALSVITCFGHIAAETANGYCLYLYMLFIFLLLMLEAGVTADVVLNRDWEEDFP 120

Query: 289 EDQTGNLDHLKHFIKDNFDICKWIGLSVVAVQGLSLLFAMVLKALGPHPEKYYESXXXXX 110
           +D +G+ D  K F++ NF++CKWIGLS+V VQGLS L AM+LKA+GPHP   Y+S     
Sbjct: 121 KDPSGSFDQFKGFVRSNFELCKWIGLSIVFVQGLSFLVAMILKAIGPHPS--YDSDDDYA 178

Query: 109 XXXXXXXXXXXXXPNYALGDPVYGSRNNSWNIRV 8
                        P YA+G+PV GSRNN+W+IR+
Sbjct: 179 SDRAPLLKDVVHPPPYAVGNPVMGSRNNAWSIRI 212


Top