BLASTX nr result

ID: Lithospermum22_contig00025728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025728
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containi...   130   8e-29
ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Sela...   119   3e-25
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25

>ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/73 (79%), Positives = 66/73 (90%)
 Frame = -3

Query: 412 LLWGHSERLAISLGLLHTPPGSVIRIRKNLRVCNDCHNVTKIISKLVQREIVVRDANRFH 233
           LLWGHSERLAI+ GLL TP GS+I+I KNLRVC DCHNVTK ISK+VQREI+VRDANRFH
Sbjct: 749 LLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFH 808

Query: 232 HFVDGRCSCRDYW 194
           HFV+G+CSC D+W
Sbjct: 809 HFVNGKCSCNDFW 821


>ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/73 (76%), Positives = 63/73 (86%)
 Frame = -3

Query: 412 LLWGHSERLAISLGLLHTPPGSVIRIRKNLRVCNDCHNVTKIISKLVQREIVVRDANRFH 233
           +LWGHSERLAI+ GLL TP GS+IRI KNLRVC DCH VTK ISK+V+REI+VRDANRFH
Sbjct: 733 MLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFH 792

Query: 232 HFVDGRCSCRDYW 194
           HF +G CSC DYW
Sbjct: 793 HFSNGECSCGDYW 805


>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/73 (71%), Positives = 61/73 (83%)
 Frame = -3

Query: 412  LLWGHSERLAISLGLLHTPPGSVIRIRKNLRVCNDCHNVTKIISKLVQREIVVRDANRFH 233
            +L GHSERLAI+ GLL+TPPG+ IR+ KNLRVCNDCH  TKIISK+V REI++RD  RFH
Sbjct: 1063 MLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFH 1122

Query: 232  HFVDGRCSCRDYW 194
            HF +G CSC DYW
Sbjct: 1123 HFANGTCSCGDYW 1135


>ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
           gi|300157279|gb|EFJ23905.1| hypothetical protein
           SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = -3

Query: 412 LLWGHSERLAISLGLLHTPPGSVIRIRKNLRVCNDCHNVTKIISKLVQREIVVRDANRFH 233
           LLW HSE+LAI+ GL+ TPPG+ +RI KNLRVC+DCH  TK+ISK+  REI+VRD NRFH
Sbjct: 413 LLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFH 472

Query: 232 HFVDGRCSCRDYW 194
           HF+DG CSC DYW
Sbjct: 473 HFLDGMCSCNDYW 485


>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  118 bits (296), Expect = 4e-25
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -3

Query: 412  LLWGHSERLAISLGLLHTPPGSVIRIRKNLRVCNDCHNVTKIISKLVQREIVVRDANRFH 233
            LL GHSE+LAI+ G+L+TPPG+ IR+ KNLRVCNDCH  TK ISK+++REI+VRD  RFH
Sbjct: 824  LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFH 883

Query: 232  HFVDGRCSCRDYW 194
            HF +G CSC DYW
Sbjct: 884  HFKEGTCSCGDYW 896


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