BLASTX nr result

ID: Lithospermum22_contig00025705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025705
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554401.1| PREDICTED: WD repeat-containing protein 3-li...    90   2e-16
ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
emb|CBI30172.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002266326.1| PREDICTED: WD repeat-containing protein 3 [V...    88   8e-16
emb|CAN63880.1| hypothetical protein VITISV_032251 [Vitis vinifera]    88   8e-16

>ref|XP_003554401.1| PREDICTED: WD repeat-containing protein 3-like [Glycine max]
          Length = 944

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +2

Query: 59  MVKSYFGYEESLNILGVIASGESNIVYDSSGRYVIAAALEKIHVWHMRQGLCSKTLSPKT 238
           MVK+Y  YE + +  GVIAS +SNI YDSSG+++++ ALEKI VWH+RQGLC+KTL+P +
Sbjct: 1   MVKAYLRYEPAASF-GVIASVDSNISYDSSGKHLLSPALEKIGVWHVRQGLCTKTLTPSS 59

Query: 239 PYSSSTRLVTSLASSPSSL 295
                +  VTS+ASSPSSL
Sbjct: 60  SSRGPSPSVTSIASSPSSL 78


>ref|XP_002326214.1| predicted protein [Populus trichocarpa] gi|222833407|gb|EEE71884.1|
           predicted protein [Populus trichocarpa]
          Length = 959

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
 Frame = +2

Query: 59  MVKSYFGYEESLNILGVIASGESNIVYDSSGRYVIAAALEKIHVWHMRQGLCSKTLSPKT 238
           MVKSY  YE +L+  GVIAS E NI YDSSG++++  ALEK+ VWH+RQG+C+KTL+P T
Sbjct: 1   MVKSYLRYEPALSF-GVIASVEGNIAYDSSGKHLLTPALEKVGVWHVRQGICTKTLAPST 59

Query: 239 PYSSS--TRLVTSLASSPSS 292
             S S  +  VTS+A SPSS
Sbjct: 60  SSSRSGPSLAVTSIAPSPSS 79


>emb|CBI30172.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +2

Query: 59  MVKSYFGYEESLNILGVIASGESNIVYDSSGRYVIAAALEKIHVWHMRQGLCSKTLSPKT 238
           MVK+Y  YE +    GVIAS +SNI YDSSG++++A ALEK+ VWH+RQG+C+KTL+P  
Sbjct: 1   MVKAYLRYEPAA-AFGVIASVDSNIAYDSSGKHLLAPALEKVGVWHVRQGVCTKTLTPSP 59

Query: 239 PYSSSTRLVTSLASSPSSL 295
               S+  VTS+ASS SSL
Sbjct: 60  SSRGSSFAVTSIASSQSSL 78


>ref|XP_002266326.1| PREDICTED: WD repeat-containing protein 3 [Vitis vinifera]
          Length = 952

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +2

Query: 59  MVKSYFGYEESLNILGVIASGESNIVYDSSGRYVIAAALEKIHVWHMRQGLCSKTLSPKT 238
           MVK+Y  YE +    GVIAS +SNI YDSSG++++A ALEK+ VWH+RQG+C+KTL+P  
Sbjct: 1   MVKAYLRYEPAA-AFGVIASVDSNIAYDSSGKHLLAPALEKVGVWHVRQGVCTKTLTPSP 59

Query: 239 PYSSSTRLVTSLASSPSSL 295
               S+  VTS+ASS SSL
Sbjct: 60  SSRGSSFAVTSIASSQSSL 78


>emb|CAN63880.1| hypothetical protein VITISV_032251 [Vitis vinifera]
          Length = 724

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +2

Query: 59  MVKSYFGYEESLNILGVIASGESNIVYDSSGRYVIAAALEKIHVWHMRQGLCSKTLSPKT 238
           MVK+Y  YE +    GVIAS +SNI YDSSG++++A ALEK+ VWH+RQG+C+KTL+P  
Sbjct: 1   MVKAYLRYEPAA-AFGVIASVDSNIAYDSSGKHLLAPALEKVGVWHVRQGVCTKTLTPSP 59

Query: 239 PYSSSTRLVTSLASSPSSL 295
               S+  VTS+ASS SSL
Sbjct: 60  SSRGSSFAVTSIASSQSSL 78


Top