BLASTX nr result

ID: Lithospermum22_contig00025639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025639
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   150   3e-34
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   148   1e-33
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   140   4e-31
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   139   7e-31
ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containi...   139   7e-31

>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  150 bits (379), Expect = 3e-34
 Identities = 72/89 (80%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   AGLFHKVVSSVQLAGKLEIQENTHFYNAVIYACAKAEDLMEMDRVFIRMKDKHCQPDSVT 181
           AGLFHKVVSSVQLAGK EI ENT FYNAVI ACAKAEDL+EM+RVF RMKDKHCQPDS T
Sbjct: 404 AGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTT 463

Query: 182 YELMVEAYRKEGMNDRVYDLEQEKNTAVA 268
           Y +MVEAY+KEGMND++YDLEQE+   VA
Sbjct: 464 YSIMVEAYKKEGMNDKIYDLEQERQRMVA 492


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  148 bits (373), Expect = 1e-33
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +2

Query: 2   AGLFHKVVSSVQLAGKLEIQENTHFYNAVIYACAKAEDLMEMDRVFIRMKDKHCQPDSVT 181
           AGLFHKVVSSVQLAGK EI ENT FYNAVI ACAKAEDL+EM+RVF RMKDKHCQPDS T
Sbjct: 404 AGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTT 463

Query: 182 YELMVEAYRKEGMNDRVYDLEQEK 253
           Y +MVEAY+KEGMND++YDLEQE+
Sbjct: 464 YSIMVEAYKKEGMNDKIYDLEQER 487


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  140 bits (352), Expect = 4e-31
 Identities = 68/88 (77%), Positives = 75/88 (85%)
 Frame = +2

Query: 2   AGLFHKVVSSVQLAGKLEIQENTHFYNAVIYACAKAEDLMEMDRVFIRMKDKHCQPDSVT 181
           AGLFHKV+ SV+LAGKLEI ENT FYNAVI ACAKAEDLMEMDRVF RMKDKHCQPD+ T
Sbjct: 402 AGLFHKVIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKT 461

Query: 182 YELMVEAYRKEGMNDRVYDLEQEKNTAV 265
           Y +M+EAY KEGMNDRV+ LE EK   +
Sbjct: 462 YSIMMEAYGKEGMNDRVHYLELEKKQVI 489


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  139 bits (350), Expect = 7e-31
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = +2

Query: 2   AGLFHKVVSSVQLAGKLEIQENTHFYNAVIYACAKAEDLMEMDRVFIRMKDKHCQPDSVT 181
           AGLFHKV+SSV+LAGKLEI EN  FYNAV+ ACAKAEDLMEM+RVF RMKD  CQPD  T
Sbjct: 386 AGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTT 445

Query: 182 YELMVEAYRKEGMNDRVYDLEQEKNT 259
           Y +M+EAYRKEGMND++Y LEQEK T
Sbjct: 446 YTIMIEAYRKEGMNDKIYYLEQEKQT 471


>ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  139 bits (350), Expect = 7e-31
 Identities = 66/86 (76%), Positives = 74/86 (86%)
 Frame = +2

Query: 2   AGLFHKVVSSVQLAGKLEIQENTHFYNAVIYACAKAEDLMEMDRVFIRMKDKHCQPDSVT 181
           AGLFHKV+SSV+LAGKLEI EN  FYNAV+ ACAKAEDLMEM+RVF RMKD  CQPD  T
Sbjct: 386 AGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTT 445

Query: 182 YELMVEAYRKEGMNDRVYDLEQEKNT 259
           Y +M+EAYRKEGMND++Y LEQEK T
Sbjct: 446 YTIMIEAYRKEGMNDKIYYLEQEKQT 471


Top