BLASTX nr result

ID: Lithospermum22_contig00025637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025637
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    63   5e-08
gb|AFK43402.1| unknown [Medicago truncatula]                           59   1e-06
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    59   1e-06
ref|XP_003628590.1| F-box family protein [Medicago truncatula] g...    59   1e-06
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    59   1e-06

>ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497291|gb|AES78494.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 352

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = -3

Query: 394 DVLECMPTLENLTL-KGTDDMDDEDVPFRVRKHRKVPKCLTSSLKMVSVEKFSGRRDQVA 218
           +VL   P L+NLT+ +G+ D +  +  +R+     VP+CL+S LK  S++ + G      
Sbjct: 245 EVLHHCPKLQNLTIHEGSSDRNKIEDVYRMDTPI-VPECLSSQLKTCSLKGYRGVNCDFQ 303

Query: 217 MLGHILQNASLLQTMTVMTGNMDIDAKYNFIRQLSKFRRSSVMCTIEF 74
              +IL+NA +LQ MT+   +MDI+ K+  + +LS  +R S  C I F
Sbjct: 304 FAKYILKNAKVLQIMTINASSMDINIKHQILIKLSLCQRGSTTCKISF 351


>gb|AFK43402.1| unknown [Medicago truncatula]
          Length = 211

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = -3

Query: 415 YESTLMFDVLECMPTLENLTLKGTDDMDDEDVPFRVRKHRK--VPKCLTSSLKMVSVEKF 242
           + S L+  VLE    L+ L ++   +  +E  PF   + +   VPKCL S+L  + +E +
Sbjct: 91  FNSNLLLGVLEKCHMLQVLLIQSCKE--EEPSPFGTWEPKSTIVPKCLESNLTYIHIEGY 148

Query: 241 SGRRDQVAMLGHILQNASLLQTMTV-MTGNMDIDAKYNFIRQLSKFRRSSVMCTIEF 74
            G  + +A   +IL+N  +L TM +    +MD+  KY  +++L+   R SV C ++F
Sbjct: 149 QGFEEDLAFAEYILRNGLVLHTMLIFFDTSMDLTNKYRSLKRLTDIPRGSVTCQLKF 205


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
 Frame = -3

Query: 400 MFDVLECMPTLENLTL---KGTDDMDDE---DVPFRVRKHRKVPKCLTSSLKMVSVEKFS 239
           +  +L+  P L+NLT+   K  ++  DE   D P        VP+CL+S LK   +  + 
Sbjct: 282 LLGMLKHSPKLQNLTIQDNKAIEEAIDECWKDPPI-------VPECLSSQLKTCHIRVYK 334

Query: 238 GRRDQVAMLGHILQNASLLQTMTV-MTGNMDIDAKYNFIRQLSKFRRSSVMCTIEF 74
           G +  +    +I++N+ +L+TMT+  T ++D++ KY  + +LS + R S  C + F
Sbjct: 335 GTKYDLEFTKYIMENSKVLETMTINSTRSLDMNVKYQLLMKLSSYTRGSTTCKLLF 390


>ref|XP_003628590.1| F-box family protein [Medicago truncatula]
           gi|355522612|gb|AET03066.1| F-box family protein
           [Medicago truncatula]
          Length = 420

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
 Frame = -3

Query: 415 YESTLMFDVLECMPTLENLTLKGTDDMDDEDVPFRVR----KHRKVPKCLTSSLKMVSVE 248
           + ST++ +VLE    L  L +       D++ P  +R    +   VP+CL S LK + +E
Sbjct: 300 FNSTILVNVLEKCHDLIVLIIHS-----DKEEPSSLRTWEPQSTTVPRCLISHLKYICIE 354

Query: 247 KFSGRRDQVAMLGHILQNASLLQTMTVMTG-NMDIDAKYNFIRQLSKFRRSSVMCTIEF 74
            + G  D++     IL+N  +L+TM +    ++DI  KY  I++L+   R SV C + F
Sbjct: 355 GYQGFEDELTFAEFILRNGLVLETMLIFVDISLDITNKYRSIKRLTNIPRGSVTCQLNF 413


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
 Frame = -3

Query: 448 KVFTQLTAEIDYESTLMFDVLECMPTLENLTL-------KGTDDMDDEDVPFRVRKHRKV 290
           K+  +LT     +   +  VL+  P L+NLT+          +D+D  D P        V
Sbjct: 231 KIVFELTHNWPGKWKWLTKVLQHCPKLQNLTIHEGSSDRNKIEDVDWMDTPI-------V 283

Query: 289 PKCLTSSLKMVSVEKFSGRRDQVAMLGHILQNASLLQTMTVMTGNMDIDAKYNFIRQLSK 110
           P+C +S LK  S+  + G         +IL+NA +LQTMT+    +DI+ K+  + +L+ 
Sbjct: 284 PECFSSQLKTCSLIGYKGMNCDFQFAKYILKNAKVLQTMTINASPVDINIKHQILIKLTL 343

Query: 109 FRRSSVMCTIEF 74
             R S  C I F
Sbjct: 344 CPRGSTTCKISF 355


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