BLASTX nr result
ID: Lithospermum22_contig00025618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00025618
(719 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi... 275 5e-72
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2... 263 3e-68
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi... 233 3e-59
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi... 232 7e-59
emb|CBI39619.3| unnamed protein product [Vitis vinifera] 224 2e-56
>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 275 bits (704), Expect = 5e-72
Identities = 134/239 (56%), Positives = 186/239 (77%)
Frame = +3
Query: 3 RILKLASERSLLLSFIDSNYCKKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLI 182
R+LK +++ FI +Y +IF I+NSNGF+WNTMM+AY+ N + +L+YK ++
Sbjct: 78 RLLKFSTDSP----FIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMV 133
Query: 183 FKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGN 362
+ DNYT+P+VVQ+C V EF G+E+HDHV+K+GF+ DVYV N LINMY +CGN
Sbjct: 134 KNNVGP--DNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 191
Query: 363 MRDARRVFDESPVLDVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKS 542
MRDAR++FDESPVLD VSWNSIL+GYV+ GDV+ A I+DQMP+R+++ASNSM+VLLGK
Sbjct: 192 MRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKM 251
Query: 543 GKVDEARELFNRMEDRDLVSWTAMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
G+V EA +LFN M+++D+VSW+A+IS +EQN MY EAL +F +M+ +RLD+VV+V+V
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 310
Score = 100 bits (250), Expect = 2e-19
Identities = 60/217 (27%), Positives = 108/217 (49%)
Frame = +3
Query: 69 KIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCGV 248
K+F + + W+ ++ Y + ++M+ ++ G+ +D V+ +C
Sbjct: 259 KLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM--RLDEVVVVSVLSACAH 316
Query: 249 WCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDESPVLDVVSWNSI 428
G+ +H V++MG E V + N LI+MY G + DA+++F+ S LD +SWNS+
Sbjct: 317 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSM 376
Query: 429 LSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKSGKVDEARELFNRMEDRDLVSWT 608
+SG ++ G V+ A ++D MP ++D+VSW+
Sbjct: 377 ISGCMKCGSVEKARALFDVMP-------------------------------EKDIVSWS 405
Query: 609 AMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
A+IS + Q++ + E L LF +M QIR D+ +LV+V
Sbjct: 406 AVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSV 442
>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
predicted protein [Populus trichocarpa]
Length = 793
Score = 263 bits (671), Expect = 3e-68
Identities = 131/239 (54%), Positives = 178/239 (74%)
Frame = +3
Query: 3 RILKLASERSLLLSFIDSNYCKKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLI 182
R+LK ++E L FI+ N +IF I+N NGFI NTMMK YM RN P I +YK ++
Sbjct: 63 RLLKFSTE----LPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFML 118
Query: 183 FKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGN 362
+ DNYT+PI+ QSC + AEF+G+ + DHV+K+GF+ DVY+ N LINMY +CGN
Sbjct: 119 ESNVAA--DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN 176
Query: 363 MRDARRVFDESPVLDVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKS 542
+ DAR+VFD S VLD+VSWNS+L+GYV G+V+ A +YD+MP R+VIASNSM+VL GK
Sbjct: 177 LSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKK 236
Query: 543 GKVDEARELFNRMEDRDLVSWTAMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
G V+EA +LFN M+ +DLVSW+A+IS +EQNEMY EAL LF++M+ I +D+VV+++V
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSV 295
Score = 111 bits (277), Expect = 2e-22
Identities = 63/217 (29%), Positives = 109/217 (50%)
Frame = +3
Query: 69 KIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCGV 248
K+F +K + W+ ++ Y + ++++K++ G+ ++D V+ +C
Sbjct: 244 KLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGI--MVDEVVVLSVLSACSR 301
Query: 249 WCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDESPVLDVVSWNSI 428
G+ VH VVK+G E V + N LI+MY C + A+++F ES LD +SWNS+
Sbjct: 302 LLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSM 361
Query: 429 LSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKSGKVDEARELFNRMEDRDLVSWT 608
+SGYV+ G+++ A ++D MP D+D VSW+
Sbjct: 362 ISGYVKCGEIEKARALFDSMP-------------------------------DKDNVSWS 390
Query: 609 AMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
AMIS + Q + + E L LF++M + D+ +LV+V
Sbjct: 391 AMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSV 427
Score = 68.2 bits (165), Expect = 2e-09
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Frame = +3
Query: 66 KKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCG 245
+ +F S+ + + W+ M+ Y +++ +++++++ +G D V+ +C
Sbjct: 375 RALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT--KPDETILVSVISACT 432
Query: 246 VWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDESPVLDVVSWNS 425
A +G+ +H ++ K G + ++ + LINMY G + DA VF V +WN+
Sbjct: 433 HLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNA 492
Query: 426 ILSGYVQAGDVDGAMRIYDQMPRRSVIASN-SMVVLLG---KSGKVDEARELFNRM 581
++ G G VD +++ + +M V + + V +LG G VDE FN M
Sbjct: 493 LILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSM 548
>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 233 bits (594), Expect = 3e-59
Identities = 115/241 (47%), Positives = 172/241 (71%), Gaps = 3/241 (1%)
Frame = +3
Query: 3 RILKLASERSLLLSFIDSNYCKKIFISIKNSNGFIWNTMMKAYM-IRNQPKNVILMYKDL 179
R++ +S + L+ F +Y +IF ++N N F WNT+M+A++ ++N P +L YK
Sbjct: 40 RLINFSSHSTTLVPF---HYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYK-- 94
Query: 180 IFKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCG 359
+F D+YT+PI++Q C +EFEGR++H H V GF+ DVYV N L+N+Y +CG
Sbjct: 95 LFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCG 154
Query: 360 NMRDARRVFDESPVLDVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGK 539
++ ARRVF+ESPVLD+VSWN++L+GYVQAG+V+ A R+++ MP R+ IASNSM+ L G+
Sbjct: 155 SVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGR 214
Query: 540 SGKVDEARELFN--RMEDRDLVSWTAMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLV 713
G V++AR +FN R +RD+VSW+AM+S +EQNEM EAL LF +M G + +D+VV+V
Sbjct: 215 KGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVV 274
Query: 714 T 716
+
Sbjct: 275 S 275
Score = 102 bits (253), Expect = 1e-19
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Frame = +3
Query: 108 WNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDH 287
W+ M+ Y + ++++ ++ KG +D + +C GR VH
Sbjct: 238 WSAMVSCYEQNEMGEEALVLFVEM--KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGL 295
Query: 288 VVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDES-PVLDVVSWNSILSGYVQAGDVDG 464
VK+G E V + N LI++Y CG + DARR+FD+ +LD++SWNS++SGY++ G +
Sbjct: 296 AVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQD 355
Query: 465 AMRIYDQMPRRSVIASNSMVVLLGKSGKVDEARELFNRMEDRDLVSWTAMISSFEQNEMY 644
A ++ MP + V VSW+AMIS + Q+E +
Sbjct: 356 AEMLFYSMPEKDV-------------------------------VSWSAMISGYAQHECF 384
Query: 645 VEALTLFRKMHGYQIRLDDVVLVT 716
EAL LF++M + +R D+ LV+
Sbjct: 385 SEALALFQEMQLHGVRPDETALVS 408
>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 232 bits (591), Expect = 7e-59
Identities = 111/224 (49%), Positives = 162/224 (72%)
Frame = +3
Query: 45 FIDSNYCKKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFP 224
FI +Y ++IF I+N+N F+WN M++AY+ N P +YK ++ L DNYT+P
Sbjct: 25 FIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGA--DNYTYP 82
Query: 225 IVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDESPVL 404
+++Q+C + +E+E ++VH+HV+K+GF+ DVYV N LIN + +C NM DA RVF+ES VL
Sbjct: 83 LLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVL 142
Query: 405 DVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKSGKVDEARELFNRME 584
D VSWNSIL+GY++ G+V+ A IY QMP RS+IASNSM+VL G G V EA +LF+ M
Sbjct: 143 DSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEML 202
Query: 585 DRDLVSWTAMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVT 716
++D+V+W+A+I+ F+QNEMY EA+ F MH + +D+VV V+
Sbjct: 203 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 246
Score = 90.5 bits (223), Expect = 3e-16
Identities = 56/217 (25%), Positives = 103/217 (47%)
Frame = +3
Query: 69 KIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCGV 248
K+F + + W+ ++ + + I + + G+ ++D + +C
Sbjct: 196 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV--MVDEVVAVSALSACAN 253
Query: 249 WCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGNMRDARRVFDESPVLDVVSWNSI 428
G+ +H +K+G E + + N LI MY CG++ AR++FDE+ +LD++SWNS+
Sbjct: 254 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 313
Query: 429 LSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKSGKVDEARELFNRMEDRDLVSWT 608
+SGY++ VD A I+D MP + V++ +SM
Sbjct: 314 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM----------------------------- 344
Query: 609 AMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
IS + QN+++ E L LF++M + D+ LV+V
Sbjct: 345 --ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSV 379
Score = 70.1 bits (170), Expect = 4e-10
Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 44/254 (17%)
Frame = +3
Query: 6 ILKLASERSLLLSFIDSNY---CKKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKD 176
+L L S S++ ++ N K IF S+ + W++M+ Y + + ++++
Sbjct: 304 LLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQE 363
Query: 177 LIFKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLC 356
+ G D T V+ +C A +G+ VH ++ + G +V + LI+MY C
Sbjct: 364 MQMSGF--KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC 421
Query: 357 GNMRDARRVFDESPVLDVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIAS-------- 512
G + A VF + +WN+++ G G V+ ++ ++ M + V +
Sbjct: 422 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVL 481
Query: 513 --------------------------------NSMVVLLGKSGKVDEARELFNRME-DRD 593
MV LLG++GK+ EA EL NRM D
Sbjct: 482 GACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPD 541
Query: 594 LVSWTAMISSFEQN 635
+ +W A++ + +++
Sbjct: 542 VATWGALLGACKKH 555
>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 224 bits (570), Expect = 2e-56
Identities = 116/239 (48%), Positives = 162/239 (67%)
Frame = +3
Query: 3 RILKLASERSLLLSFIDSNYCKKIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLI 182
R+LK +++ FI +Y +IF I+NSNGF+WNTMM+AY+ N + +L+YK ++
Sbjct: 66 RLLKFSTDSP----FIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMV 121
Query: 183 FKGLFCLIDNYTFPIVVQSCGVWCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYGLCGN 362
+ DNYT+P+VVQ+C V EF G+E+HDHV+K+GF+ DVYV N LINMY +CGN
Sbjct: 122 KNNVGP--DNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 179
Query: 363 MRDARRVFDESPVLDVVSWNSILSGYVQAGDVDGAMRIYDQMPRRSVIASNSMVVLLGKS 542
MRDAR++FDESPVLD VSWNSIL+GYV+ GD+
Sbjct: 180 MRDARKLFDESPVLDSVSWNSILAGYVKKGDM---------------------------- 211
Query: 543 GKVDEARELFNRMEDRDLVSWTAMISSFEQNEMYVEALTLFRKMHGYQIRLDDVVLVTV 719
G+V EA +LFN M+++D+VSW+A+IS +EQN MY EAL +F +M+ +RLD+VV+V+V
Sbjct: 212 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 270
Score = 60.1 bits (144), Expect = 4e-07
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 69 KIFISIKNSNGFIWNTMMKAYMIRNQPKNVILMYKDLIFKGLFCLIDNYTFPIVVQSCGV 248
K+F + + W+ ++ Y + ++M+ ++ G+ +D V+ +C
Sbjct: 219 KLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM--RLDEVVVVSVLSACAH 276
Query: 249 WCAEFEGREVHDHVVKMGFEFDVYVVNNLINMYG----LCGNMRDARRVFDESPVLDVVS 416
G+ +H V++MG E V + N LI+MY CG + +A VF+ V S
Sbjct: 277 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSS 336
Query: 417 WNSILSGYVQAGDVDGAMRIYDQMPRRSVIASN-SMVVLLG---KSGKVDEARELFNRME 584
WN+++ G G V+ ++ ++ +M VI + + + +LG G VDE R F M
Sbjct: 337 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 396
Query: 585 DR 590
++
Sbjct: 397 EK 398