BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025600
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526239.1| DNA binding protein, putative [Ricinus commu...    98   1e-18
ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...    94   2e-17
ref|XP_002331442.1| methyl binding domain protein [Populus trich...    94   2e-17
gb|ACU18874.1| unknown [Glycine max]                                   89   8e-16
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...    88   1e-15

>ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
           gi|223534433|gb|EEF36136.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 271

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 60/123 (48%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
 Frame = +2

Query: 275 KPSNINISSTFFNANGNANQNPIDVDSS--ELGIDERPQQADQHPENTNNQLVCYNSSAG 448
           K   I+ SS+ F A+ N  Q+P++V SS  E    E     +Q  EN + Q+V Y+  A 
Sbjct: 13  KKEAIDYSSSSFAAHSNL-QSPVEVSSSSEEDNSHETEDANEQSTENASKQIVLYDPVAN 71

Query: 449 G-GDIVPVPDPDHT---PLAPKSFSRFHSRILPSVGAFTVQCGHCLKWRLIPTKEKYEQI 616
           G G I  VP P      P A +     HSR+LPSVGAFTVQC  C KWRLIPTKEKYE+I
Sbjct: 72  GSGQIEIVPQPLQCRPHPSARRPGFLMHSRVLPSVGAFTVQCAKCFKWRLIPTKEKYEEI 131

Query: 617 REH 625
           REH
Sbjct: 132 REH 134


>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
           vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 7/108 (6%)
 Frame = +2

Query: 323 NANQNPIDVDSSELGIDE--RPQQADQHP-ENTNNQLVCYNSSAGGG-DIVPVPDPDHTP 490
           +A Q PID+ SSE   ++    +  D H  ENT+NQLV Y+  A    ++ PVPDP    
Sbjct: 28  DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYDPVANSATEVEPVPDPIQYR 87

Query: 491 LAP---KSFSRFHSRILPSVGAFTVQCGHCLKWRLIPTKEKYEQIREH 625
           L      S +   SR+LPSVGAFTVQC +C KWRLIPTKEKYE+IREH
Sbjct: 88  LPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEEIREH 135


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
           gi|222873656|gb|EEF10787.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 343

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/129 (44%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
 Frame = +2

Query: 254 QTNGIKKKPSNINISSTFFNANGNANQNPIDVDSS--ELGIDERPQQADQHPENTNNQLV 427
           +T  + KK  +    S +     ++ Q PI+V SS  E   D+     DQ  E+++ QLV
Sbjct: 7   ETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSDDTWDIDDQSIEDSSKQLV 66

Query: 428 CYNSSAG-GGDIVPVPDP--DHTPLAPKSFSRFHSRILPSVGAFTVQCGHCLKWRLIPTK 598
            Y+  A   G+I PVP P   H P    S     SR+LPSVGAFTVQC  C KWRLIPTK
Sbjct: 67  LYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKWRLIPTK 126

Query: 599 EKYEQIREH 625
           +KYE++REH
Sbjct: 127 QKYEELREH 135


>gb|ACU18874.1| unknown [Glycine max]
          Length = 139

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
 Frame = +2

Query: 335 NPIDVDSSELGIDERPQQADQHPENTNNQLVCYNSSAGGGDIVPV-PDP---DHTPLAPK 502
           +PIDV SS    ++ P       ++ +NQLV Y+  A G + + + PDP   +H PL P+
Sbjct: 32  DPIDVSSSSNDENDLPN------DDVSNQLVLYDPVANGNNAIELAPDPLQCEH-PLLPR 84

Query: 503 SF-SRFHSRILPSVGAFTVQCGHCLKWRLIPTKEKYEQIREH 625
           S  S    R+LPSVGAFTVQC  C KWRLIPTKEKYE+IREH
Sbjct: 85  SKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYEEIREH 126


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
           [Glycine max]
          Length = 309

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
 Frame = +2

Query: 335 NPIDVDSSELGIDERPQQADQHPENTNNQLVCYNSSAGGGDIVPV-PDP---DHTPLAPK 502
           +PIDV SS    ++ P       ++ +NQLV Y+  A G + + + PDP   +H PL P+
Sbjct: 32  DPIDVSSSSDDENDLPN------DDVSNQLVLYDPVANGNNAIELAPDPLQCEH-PLLPR 84

Query: 503 SF-SRFHSRILPSVGAFTVQCGHCLKWRLIPTKEKYEQIREH 625
           S  S    R+LPSVGAFTVQC  C KWRLIPTKEKYE+IREH
Sbjct: 85  SKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYEEIREH 126