BLASTX nr result

ID: Lithospermum22_contig00025536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025536
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591552.1| Katanin p60 ATPase-containing subunit [Medic...    56   1e-11
ref|XP_003591553.1| Katanin p60 ATPase-containing subunit [Medic...    56   1e-11
ref|XP_003591554.1| Katanin p60 ATPase-containing subunit [Medic...    56   1e-11
ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|2...    52   6e-11
ref|XP_002301474.1| predicted protein [Populus trichocarpa] gi|2...    52   6e-11

>ref|XP_003591552.1| Katanin p60 ATPase-containing subunit [Medicago truncatula]
            gi|355480600|gb|AES61803.1| Katanin p60 ATPase-containing
            subunit [Medicago truncatula]
          Length = 1237

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = -2

Query: 238  KYAHEQXXXXXXXXXXXXXELLQWNDLYGEGGSRKKTSLSY 116
            KYAHEQ             ELLQWNDLYGEGGSRKKTSLSY
Sbjct: 1195 KYAHEQVCASVSSDSTNMTELLQWNDLYGEGGSRKKTSLSY 1235



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 363  HCPIRXXXXXXXXXXXXXXXXNKPLPSLYSSADVHPLRLED 241
            HCPIR                NKPLP L SSAD+ PL++ED
Sbjct: 1153 HCPIREILEKEKKERTSALAENKPLPRLCSSADIRPLKIED 1193


>ref|XP_003591553.1| Katanin p60 ATPase-containing subunit [Medicago truncatula]
            gi|355480601|gb|AES61804.1| Katanin p60 ATPase-containing
            subunit [Medicago truncatula]
          Length = 1229

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = -2

Query: 238  KYAHEQXXXXXXXXXXXXXELLQWNDLYGEGGSRKKTSLSY 116
            KYAHEQ             ELLQWNDLYGEGGSRKKTSLSY
Sbjct: 1187 KYAHEQVCASVSSDSTNMTELLQWNDLYGEGGSRKKTSLSY 1227



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 363  HCPIRXXXXXXXXXXXXXXXXNKPLPSLYSSADVHPLRLED 241
            HCPIR                NKPLP L SSAD+ PL++ED
Sbjct: 1145 HCPIREILEKEKKERTSALAENKPLPRLCSSADIRPLKIED 1185


>ref|XP_003591554.1| Katanin p60 ATPase-containing subunit [Medicago truncatula]
            gi|355480602|gb|AES61805.1| Katanin p60 ATPase-containing
            subunit [Medicago truncatula]
          Length = 1211

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = -2

Query: 238  KYAHEQXXXXXXXXXXXXXELLQWNDLYGEGGSRKKTSLSY 116
            KYAHEQ             ELLQWNDLYGEGGSRKKTSLSY
Sbjct: 1169 KYAHEQVCASVSSDSTNMTELLQWNDLYGEGGSRKKTSLSY 1209



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 363  HCPIRXXXXXXXXXXXXXXXXNKPLPSLYSSADVHPLRLED 241
            HCPIR                NKPLP L SSAD+ PL++ED
Sbjct: 1127 HCPIREILEKEKKERTSALAENKPLPRLCSSADIRPLKIED 1167


>ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|222861787|gb|EEE99329.1|
            predicted protein [Populus trichocarpa]
          Length = 1231

 Score = 52.4 bits (124), Expect(2) = 6e-11
 Identities = 26/41 (63%), Positives = 27/41 (65%)
 Frame = -2

Query: 238  KYAHEQXXXXXXXXXXXXXELLQWNDLYGEGGSRKKTSLSY 116
            +YAHEQ             ELLQWNDLYGEGGSRKK SLSY
Sbjct: 1189 RYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKKKSLSY 1229



 Score = 39.3 bits (90), Expect(2) = 6e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 363  HCPIRXXXXXXXXXXXXXXXXNKPLPSLYSSADVHPLRLED 241
            HCPIR                N PLP LYSSAD+ PL++ED
Sbjct: 1147 HCPIREILEKEKKERTLALAENSPLPILYSSADIRPLKMED 1187


>ref|XP_002301474.1| predicted protein [Populus trichocarpa] gi|222843200|gb|EEE80747.1|
            predicted protein [Populus trichocarpa]
          Length = 1223

 Score = 52.4 bits (124), Expect(2) = 6e-11
 Identities = 26/41 (63%), Positives = 27/41 (65%)
 Frame = -2

Query: 238  KYAHEQXXXXXXXXXXXXXELLQWNDLYGEGGSRKKTSLSY 116
            +YAHEQ             ELLQWNDLYGEGGSRKK SLSY
Sbjct: 1181 RYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKKKSLSY 1221



 Score = 39.3 bits (90), Expect(2) = 6e-11
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -3

Query: 363  HCPIRXXXXXXXXXXXXXXXXNKPLPSLYSSADVHPLRLED 241
            HCPIR                N PLP+LYSS+D+ PL++ED
Sbjct: 1139 HCPIREILKTEKKERTLALAENSPLPTLYSSSDIRPLKMED 1179


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