BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025488
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    99   1e-21
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             100   1e-21
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              100   1e-21
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    99   1e-21
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    93   1e-20

>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 99.0 bits (245), Expect(2) = 1e-21
 Identities = 48/87 (55%), Positives = 56/87 (64%)
 Frame = +2

Query: 11  LSTAGKEVFIMSVLQTIPTFTMQCFWLPLQTCNEINTILANFWWGSDTANKKKIH*LSWQ 190
           LS AG+EV I SV Q IPT+ M CF LP   C EI +++ NFWWG      +KIH  SW+
Sbjct: 33  LSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWG-QKEETRKIHWTSWK 91

Query: 191 SLCKQKSEGGLGFRDTQSFNQALLCKQ 271
            LCK K  GG+GFR  Q FN ALL KQ
Sbjct: 92  QLCKSKLRGGMGFRCLQHFNSALLAKQ 118



 Score = 29.3 bits (64), Expect(2) = 1e-21
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 306 SQVYKDRYFPWTSFWAAELGPKPS 377
           ++V+K RYFP TSF  A +G  PS
Sbjct: 131 ARVFKARYFPQTSFLDALVGSNPS 154


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  100 bits (250), Expect(2) = 1e-21
 Identities = 48/89 (53%), Positives = 58/89 (65%)
 Frame = +2

Query: 5    RLLSTAGKEVFIMSVLQTIPTFTMQCFWLPLQTCNEINTILANFWWGSDTANKKKIH*LS 184
            R LS  GKEV + SV   +P F M CF LP+ TC  + + +A+FWW S   + +KIH  S
Sbjct: 745  RCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDS-CDHSRKIHWQS 803

Query: 185  WQSLCKQKSEGGLGFRDTQSFNQALLCKQ 271
            W+ LC  K  GGLGFRD QSFNQALL KQ
Sbjct: 804  WERLCLPKDSGGLGFRDIQSFNQALLAKQ 832



 Score = 26.9 bits (58), Expect(2) = 1e-21
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 306 SQVYKDRYFPWTSFWAAELGPKPSSGSISIM 398
           S++ K RYF  T F  A L  +PS G  SI+
Sbjct: 845 SRLLKSRYFDATDFLDAALSQRPSFGWRSIL 875


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  100 bits (250), Expect(2) = 1e-21
 Identities = 48/89 (53%), Positives = 58/89 (65%)
 Frame = +2

Query: 5    RLLSTAGKEVFIMSVLQTIPTFTMQCFWLPLQTCNEINTILANFWWGSDTANKKKIH*LS 184
            R LS  GKEV + SV   +P F M CF LP+ TC  + + +A+FWW S   + +KIH  S
Sbjct: 748  RCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDS-CDHSRKIHWQS 806

Query: 185  WQSLCKQKSEGGLGFRDTQSFNQALLCKQ 271
            W+ LC  K  GGLGFRD QSFNQALL KQ
Sbjct: 807  WERLCLPKDSGGLGFRDIQSFNQALLAKQ 835



 Score = 26.9 bits (58), Expect(2) = 1e-21
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 306 SQVYKDRYFPWTSFWAAELGPKPSSGSISIM 398
           S++ K RYF  T F  A L  +PS G  SI+
Sbjct: 848 SRLLKSRYFDATDFLDAALSQRPSFGWRSIL 878


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 98.6 bits (244), Expect(2) = 1e-21
 Identities = 47/89 (52%), Positives = 58/89 (65%)
 Frame = +2

Query: 5   RLLSTAGKEVFIMSVLQTIPTFTMQCFWLPLQTCNEINTILANFWWGSDTANKKKIH*LS 184
           + LS AG+EV I SV Q IPT+ M CF LP   C+EI +++ NFWW       +KIH  S
Sbjct: 31  KFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWW-XQKEETRKIHWTS 89

Query: 185 WQSLCKQKSEGGLGFRDTQSFNQALLCKQ 271
           W+ LCK K +GG+GFR  Q FN ALL KQ
Sbjct: 90  WKQLCKSKLQGGMGFRCLQXFNSALLAKQ 118



 Score = 29.3 bits (64), Expect(2) = 1e-21
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 306 SQVYKDRYFPWTSFWAAELGPKPS 377
           ++V+K RYFP TSF  A +G  PS
Sbjct: 131 ARVFKARYFPQTSFLDALVGSNPS 154


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 93.2 bits (230), Expect(2) = 1e-20
 Identities = 48/89 (53%), Positives = 55/89 (61%)
 Frame = +2

Query: 5    RLLSTAGKEVFIMSVLQTIPTFTMQCFWLPLQTCNEINTILANFWWGSDTANKKKIH*LS 184
            +LLS AGKEV I +V Q IP +TM  F LP  T + IN  +A FWWG +    K IH   
Sbjct: 1070 KLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKE--GGKGIHWRR 1127

Query: 185  WQSLCKQKSEGGLGFRDTQSFNQALLCKQ 271
            W  LC  K +GGLGFRD   FNQALL KQ
Sbjct: 1128 WSDLCFSKKDGGLGFRDLSLFNQALLGKQ 1156



 Score = 31.6 bits (70), Expect(2) = 1e-20
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 306  SQVYKDRYFPWTSFWAAELGPKPS 377
            +++ K +YFPW  F  AELG  PS
Sbjct: 1169 ARMLKAKYFPWDDFMEAELGSSPS 1192