BLASTX nr result

ID: Lithospermum22_contig00025445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025445
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]                        99   6e-19
dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]                             99   6e-19
gb|ABG37638.1| transposase [Populus trichocarpa]                       96   3e-18
gb|ABM55245.1| transposon-like protein [Beta vulgaris]                 87   1e-15
ref|XP_002455467.1| hypothetical protein SORBIDRAFT_03g011317 [S...    80   2e-13

>dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]
          Length = 988

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
 Frame = +2

Query: 17  TEAERNRDLTNNFATWFHNYVRN-NMDTAVLLNTLSVGLAPKIER---YYINGYYFDIRH 184
           T+AE ++ L ++FA WF  Y +N ++    ++  ++ G    +     +Y+NGY F  R 
Sbjct: 326 TDAEIDKCLESDFALWFKQYAQNPSLVPNEIVRDIASGPLRSVRSVPIFYVNGYKFHTRK 385

Query: 185 DDGNKSTYNNGICVRGSNYQDDDHVNYYGVIEKFWELSY-GLMYDIVVFFKCFWFD--TS 355
              N+ST+N+G+C++GSNY +  + +Y+G+I++   L Y  L       FKC WFD   S
Sbjct: 386 YGANRSTFNSGVCIKGSNYSETSN-DYFGIIDEILILEYPRLPIKKTTLFKCEWFDPTPS 444

Query: 356 KWMHVHPRNGMIQIKHKSRASKDDLFILASQTQQVYY-----LRLCLMQWRS*EVVC 511
               VH R  M+++  K + S  + FILASQ  QVY+     LR   M W    VVC
Sbjct: 445 VGTRVHLRFKMVEVNRKKKLSVYEPFILASQAMQVYFCNYPSLRRDKMDWL---VVC 498


>dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]
          Length = 812

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
 Frame = +2

Query: 17   TEAERNRDLTNNFATWFHNYVRN-NMDTAVLLNTLSVGLAPKIER---YYINGYYFDIRH 184
            T+AE ++ L ++FA WF  Y +N ++    ++  ++ G    +     +Y+NGY F  R 
Sbjct: 550  TDAEIDKCLESDFALWFKQYAQNPSLVPNEIVRDIASGPLRSVRSVPIFYVNGYKFHTRK 609

Query: 185  DDGNKSTYNNGICVRGSNYQDDDHVNYYGVIEKFWELSY-GLMYDIVVFFKCFWFD--TS 355
               N+ST+N+G+C++GSNY +  + +Y+G+I++   L Y  L       FKC WFD   S
Sbjct: 610  YGANRSTFNSGVCIKGSNYSETSN-DYFGIIDEILILEYPRLPIKKTTLFKCEWFDPTPS 668

Query: 356  KWMHVHPRNGMIQIKHKSRASKDDLFILASQTQQVYY-----LRLCLMQWRS*EVVC 511
                VH R  M+++  K + S  + FILASQ  QVY+     LR   M W    VVC
Sbjct: 669  VGTRVHLRFKMVEVNRKKKLSVYEPFILASQAMQVYFCNYPSLRRDKMDWL---VVC 722


>gb|ABG37638.1| transposase [Populus trichocarpa]
          Length = 1450

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
 Frame = +2

Query: 17   TEAERNRDLTNNFATWFHNYV-RNNMDTAVLLNTLSVGLAPKIE---RYYINGYYFDIRH 184
            TE++  +     FATWF  +V +     A  L++LS+    K++    Y+ING  F    
Sbjct: 787  TESQIFQLQDKQFATWFRTHVYQMRRSVAKSLSSLSLDPERKVKCYNEYFINGDVFHTEE 846

Query: 185  DDGNKSTYNNGICVRGSNYQDDDHVNYYGVIEKFWELSYGLMYDIVVFFKCFWFDTS-KW 361
                + TYN+G+CV+GS   + + V+YYG +E+  EL Y    + V  FKC+W++T+ + 
Sbjct: 847  YGHGRKTYNSGVCVKGSTSSELE-VDYYGRLEEVVELQYHSEQNRVFLFKCYWYETTDRG 905

Query: 362  MHVHPRNGMIQIKHKSRASK-DDLFILASQTQQVYY 466
            + V P  G+++I  K+R S  +D+F+ A Q QQVYY
Sbjct: 906  IRVDPHYGLVEINSKARLSNVNDVFVFAKQCQQVYY 941


>gb|ABM55245.1| transposon-like protein [Beta vulgaris]
          Length = 1399

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = +2

Query: 53   FATWFHNYVRNNMDTAVLLNTLSVGLAPKIE---RYYINGYYFDIRHDDGNKSTYNNGIC 223
            F +WF   V   M +  +   L++G + ++    ++++NGY F  +    NKST N G+C
Sbjct: 777  FPSWFKTNVLGAMISDDVTRALAMGPSRQVRMWNQFFVNGYNFHTQEYGKNKSTMNYGVC 836

Query: 224  VRGSNYQDDDHVNYYGVIEKFWELSY--GLMYDIVVFFKCFWFDTSKWMHVHPRNGMIQI 397
            V+ +     D V+Y+G++E+  EL Y   L     + FKC W ++ K M++H +  ++++
Sbjct: 837  VQAA-----DRVDYFGILEEVIELVYHGNLGVYKTILFKCNWMNSDKGMNIHEQYKLVEV 891

Query: 398  KHKSRASKDDLFILASQTQQVYY-----LRLCLMQW 490
             H  +  K D F+L+ Q  QVYY     LR   +QW
Sbjct: 892  NHTKKYPKYDPFVLSYQVSQVYYASYPSLRRDKVQW 927


>ref|XP_002455467.1| hypothetical protein SORBIDRAFT_03g011317 [Sorghum bicolor]
           gi|241927442|gb|EES00587.1| hypothetical protein
           SORBIDRAFT_03g011317 [Sorghum bicolor]
          Length = 515

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
 Frame = +2

Query: 41  LTNNFATWFHNYVRNNMDTAVLLNTLSVGLAPKI---ERYYINGYYF-DIRHDDGNK--S 202
           +TN F  WF N  R + +    L  L+ G   ++     Y +NGY F  +R+++     +
Sbjct: 295 MTNEFVDWFKNTCRKDTEADEDLCNLANGCKSRVLSYSSYDVNGYRFRSVRYENSRAKLT 354

Query: 203 TYNNGICVRGSNYQDDDHVNYYGVIEKFWELSYGLMYDI-VVFFKCFWFDTSKWMHVHPR 379
           T N G+C+  S   DD  ++YYGV+E   +LS+     I +V  +C WFD    +   P+
Sbjct: 355 TVNTGVCLT-SFTSDDQQLDYYGVVEDIIKLSFNAGRKIEMVLLQCRWFDPISGLRSEPK 413

Query: 380 NGMIQIKHKSRASKDDLFILASQTQQVYYLR 472
            G++++K  SR    + F +A Q   VYYL+
Sbjct: 414 LGLVEVKPSSRLVNFEPFAMAHQATLVYYLK 444


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