BLASTX nr result

ID: Lithospermum22_contig00025427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025427
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234262.1| myb-related transcription factor [Solanum ly...    76   4e-12
gb|ACK43221.1| myb-related transcription factor [Panax ginseng]        76   5e-12
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...    75   1e-11
gb|ABU53925.1| myb-related transcription factor [Datura metel]         75   1e-11
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...    74   2e-11

>ref|NP_001234262.1| myb-related transcription factor [Solanum lycopersicum]
           gi|1370140|emb|CAA66952.1| THM18 [Solanum lycopersicum]
          Length = 265

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 50/128 (39%), Positives = 58/128 (45%), Gaps = 40/128 (31%)
 Frame = -1

Query: 448 RWSAIAAKLPGRTDNEIKNVWHTNLKKKLKNYQLPQVS---------------------N 332
           RWSAIAA+LPGRTDNEIKN+WHTNLKKKLKNYQ  Q S                     N
Sbjct: 88  RWSAIAARLPGRTDNEIKNIWHTNLKKKLKNYQPCQNSKRHSKTSHVSNKGPTTSESSNN 147

Query: 331 EPSSAMIKTHXXXXXXXXXXXXXXXXSITLV-------------------KCFPQIDESF 209
              S   K H                S+TLV                   + FP+IDESF
Sbjct: 148 SDLSTSTKQHIKIAPNSPQLSSSEMSSVTLVVDDNQMVIIKEEKIESSSSEYFPKIDESF 207

Query: 208 WSEHCPSE 185
           W++   +E
Sbjct: 208 WADELSTE 215


>gb|ACK43221.1| myb-related transcription factor [Panax ginseng]
          Length = 238

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 48/114 (42%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
 Frame = -1

Query: 448 RWSAIAAKLPGRTDNEIKNVWHTNLKKKLKNYQLPQVSNEPSSAMIKTH----------- 302
           RWSA+AAKLPGRTDNEIKNVWHT+LKKKLKNYQ          +MIK++           
Sbjct: 88  RWSAMAAKLPGRTDNEIKNVWHTHLKKKLKNYQPSSQVVTKQQSMIKSNGHKNPDFSARP 147

Query: 301 --XXXXXXXXXXXXXXXXSITLVK---------CFPQIDESFWSEHCPSEMSSS 173
                               T VK          FP+IDESFW++   S+M  S
Sbjct: 148 EVCGPPQGSSSELSSVTVMTTAVKQEQMDSSESTFPEIDESFWTQAEDSKMEFS 201


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = -1

Query: 448 RWSAIAAKLPGRTDNEIKNVWHTNLKKKLKNYQLPQVSNEPS 323
           RWSAIAA+LPGRTDNEIKNVWHT+LKK+LKNYQ PQ S + S
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQNSKKHS 129


>gb|ABU53925.1| myb-related transcription factor [Datura metel]
          Length = 278

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -1

Query: 448 RWSAIAAKLPGRTDNEIKNVWHTNLKKKLKNYQLPQVS 335
           RWSAIAA+LPGRTDNEIKNVWHT+LKK+LKNYQ PQ S
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQTS 125


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -1

Query: 448 RWSAIAAKLPGRTDNEIKNVWHTNLKKKLKNYQLPQVSNEPS 323
           RWSAIAA+LPGRTDNEIKNVWHT+LKK+LKNYQ PQ S   S
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQNSKRHS 129


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