BLASTX nr result

ID: Lithospermum22_contig00025405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025405
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arab...    62   6e-15
gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsi...    62   8e-15
ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arab...    62   8e-15
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    62   8e-15
ref|XP_003537503.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    62   8e-15

>ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp.
           lyrata] gi|297315499|gb|EFH45922.1| hypothetical protein
           ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 62.0 bits (149), Expect(2) = 6e-15
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
           EFSH+SGRDLVNM KK TN  PIIEDA HP +YRMLV MV V+  D
Sbjct: 183 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPSKYRMLVGMVDVIFSD 228



 Score = 43.9 bits (102), Expect(2) = 6e-15
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 355 ARVLYLGAASGTTVSRVSDLVGP 287
           A+VLYLGAASGTTVS VSDLVGP
Sbjct: 153 AKVLYLGAASGTTVSHVSDLVGP 175


>gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]
          Length = 320

 Score = 61.6 bits (148), Expect(2) = 8e-15
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
           EFSH+SGRDLVNM KK TN  PIIEDA HP +YRMLV MV V+  D
Sbjct: 186 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 231



 Score = 43.9 bits (102), Expect(2) = 8e-15
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 355 ARVLYLGAASGTTVSRVSDLVGP 287
           A+VLYLGAASGTTVS VSDLVGP
Sbjct: 156 AKVLYLGAASGTTVSHVSDLVGP 178


>ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| rRNA 2'-O-methyltransferase
           fibrillarin 2 [Arabidopsis thaliana]
          Length = 320

 Score = 61.6 bits (148), Expect(2) = 8e-15
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
           EFSH+SGRDLVNM KK TN  PIIEDA HP +YRMLV MV V+  D
Sbjct: 186 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 231



 Score = 43.9 bits (102), Expect(2) = 8e-15
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 355 ARVLYLGAASGTTVSRVSDLVGP 287
           A+VLYLGAASGTTVS VSDLVGP
Sbjct: 156 AKVLYLGAASGTTVSHVSDLVGP 178


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score = 61.6 bits (148), Expect(2) = 8e-15
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
           EFSH+SGRDLVNM KK TN  PIIEDA HP +YRMLV MV V+  D
Sbjct: 184 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 229



 Score = 43.9 bits (102), Expect(2) = 8e-15
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 355 ARVLYLGAASGTTVSRVSDLVGP 287
           ARVLYLGAASGTTVS VSD+VGP
Sbjct: 154 ARVLYLGAASGTTVSHVSDVVGP 176


>ref|XP_003537503.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 315

 Score = 61.6 bits (148), Expect(2) = 8e-15
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
           EFSH+SGRDLVNM KK TN  PIIEDA HP +YRMLV MV V+  D
Sbjct: 182 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 227



 Score = 43.9 bits (102), Expect(2) = 8e-15
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 355 ARVLYLGAASGTTVSRVSDLVGP 287
           ARVLYLGAASGTTVS VSD+VGP
Sbjct: 152 ARVLYLGAASGTTVSHVSDVVGP 174


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