BLASTX nr result

ID: Lithospermum22_contig00025379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025379
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002324478.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis...   101   7e-20
ref|XP_002534087.1| zinc finger protein, putative [Ricinus commu...   100   1e-19
ref|XP_004146361.1| PREDICTED: zinc finger protein 2-like [Cucum...    93   3e-17

>ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|222870529|gb|EEF07660.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  110 bits (275), Expect = 2e-22
 Identities = 68/136 (50%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
 Frame = +3

Query: 96  MSYETNRSFNLNLKYNTEXXXXXXLFP-----KNSPSEPRVFSCNYCRRKFYSSQALGGH 260
           M ++ N S +L+L  N +      L P     ++SP+EPR+FSCNYC+RKFYSSQALGGH
Sbjct: 1   MDFQPNTSLHLSLPSN-QLNLELVLEPSSSSSRHSPAEPRIFSCNYCQRKFYSSQALGGH 59

Query: 261 QNAHKLERTLMKKSRERHSSISPHHAGSNNHHRTTGEN--SRNGGMEDMNDYFSYKNIID 434
           QNAHKLERTL KKSRE  SS+   H GSN  +  T  N  SR G     +  +  +N+  
Sbjct: 60  QNAHKLERTLAKKSREMSSSVRA-HGGSNPRYGRTEMNYGSREGIGGSWSMVYRTENV-- 116

Query: 435 DVHQDELDHLDLSLRL 482
              Q+EL  LDLSLRL
Sbjct: 117 ---QEELSQLDLSLRL 129


>ref|XP_002324478.1| predicted protein [Populus trichocarpa] gi|222865912|gb|EEF03043.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  104 bits (259), Expect = 1e-20
 Identities = 68/140 (48%), Positives = 83/140 (59%), Gaps = 11/140 (7%)
 Frame = +3

Query: 96  MSYETNRSFNLNLKYNTEXXXXXXLFPKNS-------PSEPRVFSCNYCRRKFYSSQALG 254
           M ++ N S +L+L  N +      L P +S       P+EPR+FSCNYCRRKFYSSQALG
Sbjct: 1   MDFQPNTSLHLSLPSN-QLNLELVLEPSSSSSSSPHSPAEPRIFSCNYCRRKFYSSQALG 59

Query: 255 GHQNAHKLERTLMKKSRERHSSISPHHAGSNN----HHRTTGENSRNGGMEDMNDYFSYK 422
           GHQNAHKLERTL KKSRE  SS+  H  G +N    HH   G     GG   +   +  +
Sbjct: 60  GHQNAHKLERTLAKKSREMSSSVRAH--GRSNPRFEHHGHAGV----GGSWSL--VYRTE 111

Query: 423 NIIDDVHQDELDHLDLSLRL 482
           N+     Q+EL  LDLSLRL
Sbjct: 112 NV-----QEELSQLDLSLRL 126


>ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis vinifera]
          Length = 154

 Score =  101 bits (252), Expect = 7e-20
 Identities = 69/154 (44%), Positives = 87/154 (56%), Gaps = 27/154 (17%)
 Frame = +3

Query: 102 YETNRSFNLNLKYNTEXXXXXXLFPKNS-------PSEPRVFSCNYCRRKFYSSQALGGH 260
           ++ N S +L+L  NTE      L   +S       P+EPRVFSCNYC+RKFYSSQALGGH
Sbjct: 4   FQPNTSLHLSLA-NTEVNLELVLEHSSSSSSSPLSPAEPRVFSCNYCQRKFYSSQALGGH 62

Query: 261 QNAHKLERTLMKKSRERHSSISPHHAGSNNHHRTTG--------------ENSRNGG--M 392
           QNAHKLERTL KKSRE  S++ P H G N     +G              E+  + G   
Sbjct: 63  QNAHKLERTLAKKSRELSSAVRP-HGGPNQRSNASGTGLFRRTQQPVVGFEHQGHAGRFQ 121

Query: 393 EDMN----DYFSYKNIIDDVHQDELDHLDLSLRL 482
            DM+       +Y +  ++V Q+E  HLDLSLRL
Sbjct: 122 NDMSYGARIEMNYDSRPENV-QEEFSHLDLSLRL 154


>ref|XP_002534087.1| zinc finger protein, putative [Ricinus communis]
           gi|223525873|gb|EEF28297.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 155

 Score =  100 bits (250), Expect = 1e-19
 Identities = 66/141 (46%), Positives = 84/141 (59%), Gaps = 17/141 (12%)
 Frame = +3

Query: 111 NRSFNLNLKYNTEXXXXXXLFPKNSPSEPRVFSCNYCRRKFYSSQALGGHQNAHKLERTL 290
           N S  LNL+   E        P +SP+EPRVFSCNYC+RKFYSSQALGGHQNAHKLERTL
Sbjct: 17  NNSNQLNLELVLEPSSSSSSSP-HSPAEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTL 75

Query: 291 MKKSRERHSSISPHHAGSNNHHRTTG-----------ENSRNGG--MEDMN----DYFSY 419
            KKSRE  S++   H G +    T+G           E+  +GG  ++DM+    D +S 
Sbjct: 76  AKKSRELSSAVRA-HGGKSGSSSTSGLNHVRRNQPGFEHHGHGGRFIDDMSYGRRDSWSM 134

Query: 420 KNIIDDVHQDELDHLDLSLRL 482
               ++V  +  + LDLSLRL
Sbjct: 135 GYRPENVQDEFNNQLDLSLRL 155


>ref|XP_004146361.1| PREDICTED: zinc finger protein 2-like [Cucumis sativus]
           gi|449500288|ref|XP_004161057.1| PREDICTED: zinc finger
           protein 2-like [Cucumis sativus]
          Length = 163

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/123 (45%), Positives = 66/123 (53%), Gaps = 28/123 (22%)
 Frame = +3

Query: 198 RVFSCNYCRRKFYSSQALGGHQNAHKLERTLMKKSRERHSSISPHHAGSNNHHRTTGENS 377
           RVFSCNYC+RKFYSSQALGGHQNAHKLERTL KKSRE        +   ++HH     ++
Sbjct: 46  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRELRG-----YRSGDDHHEHHHNSN 100

Query: 378 RNGGMEDMNDYFSYK--------------NIIDDVHQ--------------DELDHLDLS 473
            N  M  MN+Y S+                I DD HQ               ++ HLDLS
Sbjct: 101 NNSMMMMMNNYSSHNLWNVETITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLS 160

Query: 474 LRL 482
           LRL
Sbjct: 161 LRL 163


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