BLASTX nr result

ID: Lithospermum22_contig00025307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025307
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI45550.2| potassium channel [Nicotiana tabacum]                   60   2e-07
dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum]            60   2e-07
ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>gb|ACI45550.2| potassium channel [Nicotiana tabacum]
          Length = 641

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
 Frame = -2

Query: 199 LGDLDHEPVQVKQTANHD--GQGEESRIVYASRT---------RVIIHGHHPDDKQGKDG 53
           L DLD E   V +    D  GQ ++  IV  + T         RVIIHG+HPD+++  +G
Sbjct: 528 LDDLDSEEATVIEAGTQDQTGQAQQENIVIPTTTPVLSTTLPTRVIIHGYHPDNRRPNEG 587

Query: 52  G---KLIHLPDSIENLLDLA 2
           G   KLIHLPDS+E+LL +A
Sbjct: 588 GNAGKLIHLPDSVEDLLSIA 607


>dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum]
          Length = 639

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
 Frame = -2

Query: 199 LGDLDHEPVQVKQTANHD--GQGEESRIVYASRT---------RVIIHGHHPDDKQGKDG 53
           L DLD E   V +    D  GQ ++  IV  + T         RVIIHG+HPD+++  +G
Sbjct: 526 LDDLDSEEATVIEAGTQDQTGQAQQENIVIPTTTPVLSTTLPTRVIIHGYHPDNRRPNEG 585

Query: 52  G---KLIHLPDSIENLLDLA 2
           G   KLIHLPDS+E+LL +A
Sbjct: 586 GNAGKLIHLPDSVEDLLSIA 605


>ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|222854604|gb|EEE92151.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -2

Query: 103 RVIIHGHHPDDKQGKDGGKLIHLPDSIENLLDLA 2
           RVIIHGHHP++  G   GKLIHLPDS ENL D+A
Sbjct: 519 RVIIHGHHPNETTGDTMGKLIHLPDSTENLFDIA 552


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