BLASTX nr result
ID: Lithospermum22_contig00025307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00025307 (200 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACI45550.2| potassium channel [Nicotiana tabacum] 60 2e-07 dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum] 60 2e-07 ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >gb|ACI45550.2| potassium channel [Nicotiana tabacum] Length = 641 Score = 60.1 bits (144), Expect = 2e-07 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 14/80 (17%) Frame = -2 Query: 199 LGDLDHEPVQVKQTANHD--GQGEESRIVYASRT---------RVIIHGHHPDDKQGKDG 53 L DLD E V + D GQ ++ IV + T RVIIHG+HPD+++ +G Sbjct: 528 LDDLDSEEATVIEAGTQDQTGQAQQENIVIPTTTPVLSTTLPTRVIIHGYHPDNRRPNEG 587 Query: 52 G---KLIHLPDSIENLLDLA 2 G KLIHLPDS+E+LL +A Sbjct: 588 GNAGKLIHLPDSVEDLLSIA 607 >dbj|BAD81035.1| potassium channel NtKC1 [Nicotiana tabacum] Length = 639 Score = 60.1 bits (144), Expect = 2e-07 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 14/80 (17%) Frame = -2 Query: 199 LGDLDHEPVQVKQTANHD--GQGEESRIVYASRT---------RVIIHGHHPDDKQGKDG 53 L DLD E V + D GQ ++ IV + T RVIIHG+HPD+++ +G Sbjct: 526 LDDLDSEEATVIEAGTQDQTGQAQQENIVIPTTTPVLSTTLPTRVIIHGYHPDNRRPNEG 585 Query: 52 G---KLIHLPDSIENLLDLA 2 G KLIHLPDS+E+LL +A Sbjct: 586 GNAGKLIHLPDSVEDLLSIA 605 >ref|XP_002308628.1| predicted protein [Populus trichocarpa] gi|222854604|gb|EEE92151.1| predicted protein [Populus trichocarpa] Length = 586 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = -2 Query: 103 RVIIHGHHPDDKQGKDGGKLIHLPDSIENLLDLA 2 RVIIHGHHP++ G GKLIHLPDS ENL D+A Sbjct: 519 RVIIHGHHPNETTGDTMGKLIHLPDSTENLFDIA 552