BLASTX nr result

ID: Lithospermum22_contig00025284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025284
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                       122   4e-26
gb|AEV41133.1| D1-type cyclin [Populus x canadensis]                  114   6e-24
ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|1...   114   6e-24
ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...   113   1e-23
gb|ADG86424.1| cyclin D1 [Passiflora morifolia]                       112   4e-23

>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/113 (55%), Positives = 80/113 (70%)
 Frame = +2

Query: 176 MSVSCSNDCLSDLLCREDSGNVSSFSATGESELPECSSHVVENHLPPFDESVNGLVKDES 355
           MS+SCS DC SDLLC EDSG +S        + PECS      +   FD+S+   ++ E 
Sbjct: 1   MSISCS-DCFSDLLCCEDSGILSG------DDRPECSYDF--EYSGDFDDSIAEFIEQER 51

Query: 356 KYVVGVEYLERFQSNSLDLVAREDAIAWILKAQRFYGFQPLTAHLSVNYMDRF 514
           K+V G++Y+ERFQS  LD  ARE+++AWILK QRFYGFQPLTA+LSVNY+DRF
Sbjct: 52  KFVPGIDYVERFQSQVLDASAREESVAWILKVQRFYGFQPLTAYLSVNYLDRF 104


>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
          Length = 327

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/107 (57%), Positives = 76/107 (71%)
 Frame = +2

Query: 194 NDCLSDLLCREDSGNVSSFSATGESELPECSSHVVENHLPPFDESVNGLVKDESKYVVGV 373
           +DCLSDLLC EDS ++ S    GES  PECSS + E+H    + S+ G ++DE  +V G 
Sbjct: 4   SDCLSDLLCGEDSSDIFS----GES--PECSSDL-ESHDFVEESSIAGFIEDERNFVPGY 56

Query: 374 EYLERFQSNSLDLVAREDAIAWILKAQRFYGFQPLTAHLSVNYMDRF 514
           +Y  RFQS SLD  ARE ++AWILK Q  YGFQPLTA+LSVNY+DRF
Sbjct: 57  DYFSRFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRF 103


>ref|XP_002312511.1| predicted protein [Populus trichocarpa]
           gi|159025697|emb|CAN88849.1| D1-type cyclin [Populus
           trichocarpa] gi|222852331|gb|EEE89878.1| predicted
           protein [Populus trichocarpa]
          Length = 328

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/107 (57%), Positives = 76/107 (71%)
 Frame = +2

Query: 194 NDCLSDLLCREDSGNVSSFSATGESELPECSSHVVENHLPPFDESVNGLVKDESKYVVGV 373
           +DCLSDLLC EDS ++ S    GES  PECSS + E+H    + S+ G ++DE  +V G 
Sbjct: 4   SDCLSDLLCGEDSSDIFS----GES--PECSSDL-ESHDFVEESSIAGFIEDERNFVPGY 56

Query: 374 EYLERFQSNSLDLVAREDAIAWILKAQRFYGFQPLTAHLSVNYMDRF 514
           +Y  RFQS SLD  ARE ++AWILK Q  YGFQPLTA+LSVNY+DRF
Sbjct: 57  DYFSRFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRF 103


>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/116 (55%), Positives = 79/116 (68%)
 Frame = +2

Query: 167 ATIMSVSCSNDCLSDLLCREDSGNVSSFSATGESELPECSSHVVENHLPPFDESVNGLVK 346
           A IMS+SCS DC +DLLC EDS  + S   TG+S  PE SS +         ES+   ++
Sbjct: 37  AAIMSLSCS-DCFNDLLCSEDSSEIFS---TGDS--PEYSSDLESP--AGTVESIASFIE 88

Query: 347 DESKYVVGVEYLERFQSNSLDLVAREDAIAWILKAQRFYGFQPLTAHLSVNYMDRF 514
           DE  +V G +YL RFQS SLD  ARED++AWILK Q +Y FQPLTA+LSVNY+DRF
Sbjct: 89  DERNFVPGFDYLSRFQSRSLDASAREDSVAWILKVQTYYRFQPLTAYLSVNYLDRF 144


>gb|ADG86424.1| cyclin D1 [Passiflora morifolia]
          Length = 331

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/112 (56%), Positives = 78/112 (69%)
 Frame = +2

Query: 176 MSVSCSNDCLSDLLCREDSGNVSSFSATGESELPECSSHVVENHLPPFDESVNGLVKDES 355
           MSVSCS  CLSDLLC EDS  + S    GES  PE SS  VE      +ES+ G ++DE 
Sbjct: 1   MSVSCSQ-CLSDLLCGEDSSEILS----GES--PESSSSDVEYPGGFIEESIAGYIEDER 53

Query: 356 KYVVGVEYLERFQSNSLDLVAREDAIAWILKAQRFYGFQPLTAHLSVNYMDR 511
            +V GV+YL RFQS SLD  ARE+++AWILK Q + GF+PLT +LSV+Y+DR
Sbjct: 54  NFVPGVDYLSRFQSRSLDASAREESVAWILKVQAWLGFRPLTGYLSVDYLDR 105


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