BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025247
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   124   5e-28
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   124   5e-28
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   121   8e-28
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   123   1e-27
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   120   2e-27

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  124 bits (311), Expect(2) = 5e-28
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   KEICLDIISE-GLLGARPVTFPMEQQHRLGSSTSPLLCDVERFRRLVDHLLYLSFTRPDL 225
            ++  LDIISE GLLGARP  FP+EQ H+L  STSPLL D  R+RRLV  L+YL+ TRP+L
Sbjct: 845  RKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPEL 904

Query: 226  SYAVQVLSQFLYEPRQDHLQVALRVVKYLKGCPGQGIL 339
            SY+V  L+QF+  PRQDH   A+RVV+YLK  PGQGIL
Sbjct: 905  SYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGIL 942



 Score = 25.0 bits (53), Expect(2) = 5e-28
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 5   GVEIAHSQESLFLSQRKY 58
           G+E++ + +  +LSQRKY
Sbjct: 830 GIEVSRNAQGFYLSQRKY 847


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  124 bits (311), Expect(2) = 5e-28
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   KEICLDIISE-GLLGARPVTFPMEQQHRLGSSTSPLLCDVERFRRLVDHLLYLSFTRPDL 225
            ++  LDIISE GLLGARP  FP+EQ H+L  STSPLL D  R+RRLV  L+YL+ TRP+L
Sbjct: 845  RKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPEL 904

Query: 226  SYAVQVLSQFLYEPRQDHLQVALRVVKYLKGCPGQGIL 339
            SY+V  L+QF+  PRQDH   A+RVV+YLK  PGQGIL
Sbjct: 905  SYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGIL 942



 Score = 25.0 bits (53), Expect(2) = 5e-28
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 5   GVEIAHSQESLFLSQRKY 58
           G+E++ + +  +LSQRKY
Sbjct: 830 GIEVSRNAQGFYLSQRKY 847


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  121 bits (303), Expect(2) = 8e-28
 Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   KEICLDIISE-GLLGARPVTFPMEQQHRLGSSTSPLLCDVERFRRLVDHLLYLSFTRPDL 225
            ++  LDI+SE GLLGA+P  FP+EQ HRLG +   LL + E +RRLV  L+YL+ TRPDL
Sbjct: 835  RKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDL 894

Query: 226  SYAVQVLSQFLYEPRQDHLQVALRVVKYLKGCPGQGIL 339
            +Y+V +LSQF++EPR +H + ALRVV+YLKG PGQGIL
Sbjct: 895  AYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGIL 932



 Score = 27.3 bits (59), Expect(2) = 8e-28
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 5   GVEIAHSQESLFLSQRKY 58
           G+E+A S   LFL QRKY
Sbjct: 820 GIEVARSSAGLFLCQRKY 837


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  123 bits (308), Expect(2) = 1e-27
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   KEICLDIISE-GLLGARPVTFPMEQQHRLGSSTSPLLCDVERFRRLVDHLLYLSFTRPDL 225
            ++  LDIISE GLLGARP  FP+EQ H+L  STSPLL D  R+RRLV  L+YL  TRP+L
Sbjct: 1204 RKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLVVTRPEL 1263

Query: 226  SYAVQVLSQFLYEPRQDHLQVALRVVKYLKGCPGQGIL 339
            SY+V  L+QF+  PRQDH   A+RVV+YLK  PGQGIL
Sbjct: 1264 SYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGIL 1301



 Score = 25.0 bits (53), Expect(2) = 1e-27
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 5    GVEIAHSQESLFLSQRKY 58
            G+E++ + +  +LSQRKY
Sbjct: 1189 GIEVSRNAQGFYLSQRKY 1206


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  120 bits (300), Expect(2) = 2e-27
 Identities = 59/98 (60%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +1

Query: 49   KEICLDIISE-GLLGARPVTFPMEQQHRLGSSTSPLLCDVERFRRLVDHLLYLSFTRPDL 225
            ++  LDI+SE GLLGA+P  FP+EQ HRLG +   LL ++E +RRLV  L+YL+ TRPDL
Sbjct: 1197 RKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNLESYRRLVGRLIYLAVTRPDL 1256

Query: 226  SYAVQVLSQFLYEPRQDHLQVALRVVKYLKGCPGQGIL 339
            +Y+V +LSQF+ EPR +H + ALRVV YLKG PGQGIL
Sbjct: 1257 AYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGIL 1294



 Score = 27.3 bits (59), Expect(2) = 2e-27
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 5    GVEIAHSQESLFLSQRKY 58
            G+E+A S   LFL QRKY
Sbjct: 1182 GIEVARSSAGLFLCQRKY 1199