BLASTX nr result

ID: Lithospermum22_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025218
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus...   159   4e-37
ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   158   6e-37
ref|XP_002874345.1| ribosomal protein L18 family protein [Arabid...   158   8e-37
ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   158   8e-37
ref|NP_198134.1| Ribosomal L18p/L5e family protein [Arabidopsis ...   158   8e-37

>ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
           gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 115

 Score =  159 bits (401), Expect = 4e-37
 Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
 Frame = -2

Query: 546 MVIPPPIR-PDKIATFLKPYILKLHFTNKFVNAQVFHVPSSTVACAASTQEKALRLNMEK 370
           MVIPPP++ P ++A FLKPY+LK+HFTNKFV+AQV H PS+TVAC+AS+QEKALR +ME 
Sbjct: 1   MVIPPPVKWPPRVADFLKPYVLKMHFTNKFVSAQVIHSPSATVACSASSQEKALRPSMEN 60

Query: 369 TQESSRDVRAAAKIGKLLGERLLLKDIPAVSVVSSNKEHRYHGKVKAVIDSLRNTGVKLL 190
           T    RDV AAAKIGK+LGERLL+K IPA+SV    +E +YHGKVKAV+DS+R +GVKLL
Sbjct: 61  T----RDVAAAAKIGKILGERLLVKGIPAISVF-LKREQKYHGKVKAVVDSVRESGVKLL 115


>ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
           gi|296089732|emb|CBI39551.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  158 bits (400), Expect = 6e-37
 Identities = 82/119 (68%), Positives = 97/119 (81%)
 Frame = -2

Query: 546 MVIPPPIRPDKIATFLKPYILKLHFTNKFVNAQVFHVPSSTVACAASTQEKALRLNMEKT 367
           MVIPPPI+P +I  FLKPY+LK+HFTNKFVNAQV H P++TVA AAS+QEK LR     T
Sbjct: 1   MVIPPPIKPPRIMKFLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLR----ST 56

Query: 366 QESSRDVRAAAKIGKLLGERLLLKDIPAVSVVSSNKEHRYHGKVKAVIDSLRNTGVKLL 190
            ES+RDV AAA IGK+LGERLLL+DIPAV+V    ++ +YHGKVKAVIDSLR  G+KLL
Sbjct: 57  MESTRDVAAAAMIGKILGERLLLQDIPAVTVF-LKRDQKYHGKVKAVIDSLREVGIKLL 114


>ref|XP_002874345.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297320182|gb|EFH50604.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  158 bits (399), Expect = 8e-37
 Identities = 79/119 (66%), Positives = 99/119 (83%)
 Frame = -2

Query: 546 MVIPPPIRPDKIATFLKPYILKLHFTNKFVNAQVFHVPSSTVACAASTQEKALRLNMEKT 367
           MVIPP +RP ++  +LKPY+LK+HFTNKFV+AQV H P++TVAC+AS+QEKALR    +T
Sbjct: 1   MVIPPAVRPPRLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALR----ET 56

Query: 366 QESSRDVRAAAKIGKLLGERLLLKDIPAVSVVSSNKEHRYHGKVKAVIDSLRNTGVKLL 190
            + +RDV AAAKIGK+LGERLL+KDIPAV+ +   +E RYHGKVKAVIDS+R  GVKLL
Sbjct: 57  MDITRDVAAAAKIGKILGERLLMKDIPAVT-IQMKREQRYHGKVKAVIDSVREAGVKLL 114


>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  158 bits (399), Expect = 8e-37
 Identities = 81/119 (68%), Positives = 98/119 (82%)
 Frame = -2

Query: 546 MVIPPPIRPDKIATFLKPYILKLHFTNKFVNAQVFHVPSSTVACAASTQEKALRLNMEKT 367
           MVIPPP+RP +I  FLKPY+LK+HFTNK+V+AQV H P++TV  +AS+QEKALR ++   
Sbjct: 1   MVIPPPVRPPRITQFLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRSSL--- 57

Query: 366 QESSRDVRAAAKIGKLLGERLLLKDIPAVSVVSSNKEHRYHGKVKAVIDSLRNTGVKLL 190
            E+SRDV AAAKIGK+L ERLLLKDIPAVS V   +E +YHGKVKAVIDS+R  GVKLL
Sbjct: 58  -ETSRDVAAAAKIGKILAERLLLKDIPAVS-VHLKREQKYHGKVKAVIDSIREAGVKLL 114


>ref|NP_198134.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
           gi|21554086|gb|AAM63167.1| unknown [Arabidopsis
           thaliana] gi|88011066|gb|ABD38897.1| At5g27820
           [Arabidopsis thaliana] gi|332006345|gb|AED93728.1|
           Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
          Length = 114

 Score =  158 bits (399), Expect = 8e-37
 Identities = 79/119 (66%), Positives = 99/119 (83%)
 Frame = -2

Query: 546 MVIPPPIRPDKIATFLKPYILKLHFTNKFVNAQVFHVPSSTVACAASTQEKALRLNMEKT 367
           MVIPP +RP ++  +LKPY+LK+HFTNKFV+AQV H P++TVAC+AS+QEKALR    +T
Sbjct: 1   MVIPPAVRPPRLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALR----ET 56

Query: 366 QESSRDVRAAAKIGKLLGERLLLKDIPAVSVVSSNKEHRYHGKVKAVIDSLRNTGVKLL 190
            + +RDV AA+KIGK+LGERLL+KDIPAV+ +   KE RYHGKVKAVIDS+R  GVKLL
Sbjct: 57  MDITRDVAAASKIGKILGERLLMKDIPAVT-IQMKKEQRYHGKVKAVIDSVREAGVKLL 114


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