BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025216
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   129   6e-28
emb|CBI30973.3| unnamed protein product [Vitis vinifera]              129   6e-28
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   119   7e-25
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   116   6e-24
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ...   114   3e-23

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  129 bits (325), Expect = 6e-28
 Identities = 65/140 (46%), Positives = 90/140 (64%)
 Frame = -3

Query: 845 MIQEGDGPSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGK 666
           MI+EG  PS LVY  LI G CQ  +++EAFEL NEM+               S  C QGK
Sbjct: 535 MIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGK 594

Query: 665 VDRALKFLEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNA 486
           V  ALK +ED+ GRGCL D  ++SP++ A CN G+F  A+ +FLQMVE  I+P++S+WN+
Sbjct: 595 VGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNS 654

Query: 485 LVQQLSQETRWSGGNSTYLL 426
           ++  L+QET W  G++ + L
Sbjct: 655 MLLCLTQETVWLEGDNLFHL 674


>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  129 bits (325), Expect = 6e-28
 Identities = 65/140 (46%), Positives = 90/140 (64%)
 Frame = -3

Query: 845 MIQEGDGPSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGK 666
           MI+EG  PS LVY  LI G CQ  +++EAFEL NEM+               S  C QGK
Sbjct: 383 MIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGK 442

Query: 665 VDRALKFLEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNA 486
           V  ALK +ED+ GRGCL D  ++SP++ A CN G+F  A+ +FLQMVE  I+P++S+WN+
Sbjct: 443 VGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNS 502

Query: 485 LVQQLSQETRWSGGNSTYLL 426
           ++  L+QET W  G++ + L
Sbjct: 503 MLLCLTQETVWLEGDNLFHL 522


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  119 bits (299), Expect = 7e-25
 Identities = 59/131 (45%), Positives = 79/131 (60%)
 Frame = -3

Query: 845 MIQEGDGPSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGK 666
           MI EG  P+ LVY  L+ G CQ  +++EAFEL NEM+                G C QGK
Sbjct: 480 MINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGK 539

Query: 665 VDRALKFLEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNA 486
            + ALK L+D+ GRGC+ D   +SP+I A C  G F  AL +F QM+E GI P+ S+WN+
Sbjct: 540 DESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNS 599

Query: 485 LVQQLSQETRW 453
           L+ +LS+E  W
Sbjct: 600 LLIRLSKEIIW 610



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 32/118 (27%), Positives = 56/118 (47%)
 Frame = -3

Query: 824 PSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGKVDRALKF 645
           P  +    ++  LC    + EA E+   +  +              G CR GK+  A +F
Sbjct: 277 PDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRF 336

Query: 644 LEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNALVQQL 471
           L+++  +GCL + E ++ +I  FC+ G F  AL +F  M   GI  N  +++ L++ L
Sbjct: 337 LKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGL 394


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  116 bits (291), Expect = 6e-24
 Identities = 58/132 (43%), Positives = 80/132 (60%)
 Frame = -3

Query: 845 MIQEGDGPSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGK 666
           MI EG  PS LVY  L+ G  +  +++EA EL NEM+               +G CRQGK
Sbjct: 477 MIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGK 536

Query: 665 VDRALKFLEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNA 486
           V+ ALK +EDIT RGC+ + E +SP+I   C  G+   A+ VF+QMV+ GI+P+   WN+
Sbjct: 537 VESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNS 596

Query: 485 LVQQLSQETRWS 450
           L+  LSQE  +S
Sbjct: 597 LLLSLSQERHFS 608


>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513709|gb|AES95332.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  114 bits (285), Expect = 3e-23
 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
 Frame = -3

Query: 845 MIQEGDGPSALVYANLIPGLCQIDSIKEAFELFNEMLVRXXXXXXXXXXXXXSGLCRQGK 666
           MI EG  PS LVY +L+ G  Q  SI+EA EL NEM+               +  C QGK
Sbjct: 479 MIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGK 538

Query: 665 VDRALKFLEDITGRGCLLDAENFSPIIIAFCNGGEFHNALMVFLQMVESGIVPNHSSWNA 486
           ++ ALKF+EDIT RGC+ + E +SP+I   C  G+   AL VFL+MVE GI+P+   W +
Sbjct: 539 IESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIWKS 598

Query: 485 LVQQLSQETRWSG--GNSTYLL 426
           L+  LS +  ++    N  YLL
Sbjct: 599 LLLSLSLQNNFNKNVSNIDYLL 620