BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025194
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              455   e-125
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   455   e-125
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      439   e-121
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   437   e-120
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   436   e-120

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  455 bits (1171), Expect = e-125
 Identities = 251/427 (58%), Positives = 298/427 (69%), Gaps = 8/427 (1%)
 Frame = +2

Query: 2    AKDAALMVNFSNSIIADTNPAA-------TPYSKNYVSESSSLGQLAD-VGRLRELKSSE 157
            AKDAA +V  +NS  ++T PA+       + + +   +E+  +G L D VG       +E
Sbjct: 126  AKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVG-------AE 178

Query: 158  VSLGESHASHHPLSDSGDIXXXXXXXXXXXXXXXKSIAVRSSRQXXXXXXXXXXXXXXXX 337
              + + ++      DS D+               KSI VRS+RQ                
Sbjct: 179  TGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASA 238

Query: 338  NVVXXXXXXXXXXXXXXVQEVDYSDPLRYLRGTTSSSRLLTAAEEQQLSEGIQDLLKLER 517
             VV              +QEVDYSDPLRYLRGTTS+SRLLTA EE +LSEGIQDLLKLE+
Sbjct: 239  GVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEK 298

Query: 518  LQDELTQRCGTQPTFTQWAAAAGVDQKTLRQRLNYGILCKDKMIKSNVRLVISIAKNYQG 697
            LQ++L +R G +PTF QWAAAAGVDQKTLR+R NYGI CKDKMIKSN+RLVISIAKNYQG
Sbjct: 299  LQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQG 358

Query: 698  SGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIRQSVRKSLSDQSRTIRLPFHM 877
            +GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI+Q+VRKSLSDQSRTIRLPFHM
Sbjct: 359  AGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 418

Query: 878  VEATYRVKEARKHLFTENGRHPDDDEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGIXXX 1057
            VEATYRVKEARK L++ENGRHP+++EVAEATGLSMKRL+AV+LTPKAPRSLDQKIGI   
Sbjct: 419  VEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGI--- 475

Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXXXEVISDPDAETSEDILTKQFMRDDLDKVLDSLKP 1237
                                       EVI+DPDAET+E++L KQFMR+DL+KVL+SL P
Sbjct: 476  --------------------NQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNP 515

Query: 1238 REKQVVR 1258
            REKQV+R
Sbjct: 516  REKQVIR 522


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  455 bits (1171), Expect = e-125
 Identities = 251/427 (58%), Positives = 298/427 (69%), Gaps = 8/427 (1%)
 Frame = +2

Query: 2    AKDAALMVNFSNSIIADTNPAA-------TPYSKNYVSESSSLGQLAD-VGRLRELKSSE 157
            AKDAA +V  +NS  ++T PA+       + + +   +E+  +G L D VG       +E
Sbjct: 129  AKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVG-------AE 181

Query: 158  VSLGESHASHHPLSDSGDIXXXXXXXXXXXXXXXKSIAVRSSRQXXXXXXXXXXXXXXXX 337
              + + ++      DS D+               KSI VRS+RQ                
Sbjct: 182  TGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASA 241

Query: 338  NVVXXXXXXXXXXXXXXVQEVDYSDPLRYLRGTTSSSRLLTAAEEQQLSEGIQDLLKLER 517
             VV              +QEVDYSDPLRYLRGTTS+SRLLTA EE +LSEGIQDLLKLE+
Sbjct: 242  GVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEK 301

Query: 518  LQDELTQRCGTQPTFTQWAAAAGVDQKTLRQRLNYGILCKDKMIKSNVRLVISIAKNYQG 697
            LQ++L +R G +PTF QWAAAAGVDQKTLR+R NYGI CKDKMIKSN+RLVISIAKNYQG
Sbjct: 302  LQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQG 361

Query: 698  SGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIRQSVRKSLSDQSRTIRLPFHM 877
            +GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI+Q+VRKSLSDQSRTIRLPFHM
Sbjct: 362  AGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 421

Query: 878  VEATYRVKEARKHLFTENGRHPDDDEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGIXXX 1057
            VEATYRVKEARK L++ENGRHP+++EVAEATGLSMKRL+AV+LTPKAPRSLDQKIGI   
Sbjct: 422  VEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGI--- 478

Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXXXEVISDPDAETSEDILTKQFMRDDLDKVLDSLKP 1237
                                       EVI+DPDAET+E++L KQFMR+DL+KVL+SL P
Sbjct: 479  --------------------NQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNP 518

Query: 1238 REKQVVR 1258
            REKQV+R
Sbjct: 519  REKQVIR 525


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  439 bits (1129), Expect = e-121
 Identities = 245/419 (58%), Positives = 284/419 (67%)
 Frame = +2

Query: 2    AKDAALMVNFSNSIIADTNPAATPYSKNYVSESSSLGQLADVGRLRELKSSEVSLGESHA 181
            AKDAALM   S      T P +    ++     + L +   VG +R  + SE SL E   
Sbjct: 135  AKDAALMAFNSQP----TKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDT 190

Query: 182  SHHPLSDSGDIXXXXXXXXXXXXXXXKSIAVRSSRQXXXXXXXXXXXXXXXXNVVXXXXX 361
                +S+  D+               +SI VRS+RQ                NVV     
Sbjct: 191  ----VSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVG 246

Query: 362  XXXXXXXXXVQEVDYSDPLRYLRGTTSSSRLLTAAEEQQLSEGIQDLLKLERLQDELTQR 541
                     VQEVDYSDPLRYLRG T+SSRLLT++EE +LS GIQDLLKLE+L DEL  R
Sbjct: 247  SNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVR 306

Query: 542  CGTQPTFTQWAAAAGVDQKTLRQRLNYGILCKDKMIKSNVRLVISIAKNYQGSGMNLQDL 721
             G  P+F QWAAAAG+DQ+TLR+RLN+G  CKDKMIKSNVRLVISIAKNYQGSGMNLQDL
Sbjct: 307  FGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDL 366

Query: 722  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIRQSVRKSLSDQSRTIRLPFHMVEATYRVK 901
            VQEGCRGLVRGAEKFDASKGFKFSTYAHWWI+Q+VRKSLSDQSRTIRLPFHMVEATYRVK
Sbjct: 367  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK 426

Query: 902  EARKHLFTENGRHPDDDEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGIXXXXXXXXXXX 1081
            EARK L +ENG+ P+++EVAEATGLSMKRL+AV++TPKAPRSLDQKIG            
Sbjct: 427  EARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGF----------- 475

Query: 1082 XXXXXXXXXXXXXXXXXXXEVISDPDAETSEDILTKQFMRDDLDKVLDSLKPREKQVVR 1258
                               EVI+DP+AET+ED+LTKQFMR DL+KVLD+L  REKQV+R
Sbjct: 476  ------------NMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIR 522


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  437 bits (1124), Expect = e-120
 Identities = 246/422 (58%), Positives = 287/422 (68%), Gaps = 3/422 (0%)
 Frame = +2

Query: 2    AKDAALMVNFSNSIIADTNPAATPYSKNYVSESSSLGQLADVGRLRELKSS---EVSLGE 172
            AKDAAL+V   N   A+T    T  S     ++S   Q  +  R R +  S   E    E
Sbjct: 123  AKDAALLVK--NFPSAETESKLTSPS---TIDASRWPQFTETERARIIGDSVATETGPRE 177

Query: 173  SHASHHPLSDSGDIXXXXXXXXXXXXXXXKSIAVRSSRQXXXXXXXXXXXXXXXXNVVXX 352
              +    + +S  +               + IAVRS RQ                +VV  
Sbjct: 178  ESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSV 237

Query: 353  XXXXXXXXXXXXVQEVDYSDPLRYLRGTTSSSRLLTAAEEQQLSEGIQDLLKLERLQDEL 532
                        +QEVDYSDPLRYLRGTTS+SRLLTA+EE +LS  IQDLLKLERLQ+EL
Sbjct: 238  KPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEEL 297

Query: 533  TQRCGTQPTFTQWAAAAGVDQKTLRQRLNYGILCKDKMIKSNVRLVISIAKNYQGSGMNL 712
             +R G QPTF QWAAAAGVDQ+TLR+R+N+G +CKDKMIKSN+RLVISIAKNYQG+GMNL
Sbjct: 298  AERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNL 357

Query: 713  QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIRQSVRKSLSDQSRTIRLPFHMVEATY 892
            QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI+Q+VRKSLSDQSRTIRLPFHMVEATY
Sbjct: 358  QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 417

Query: 893  RVKEARKHLFTENGRHPDDDEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGIXXXXXXXX 1072
            RVKEARK L++ENGRHPDD+EVAEA GLSMKRLSAV+LTPKAPRSLDQKIG+        
Sbjct: 418  RVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGM-------- 469

Query: 1073 XXXXXXXXXXXXXXXXXXXXXXEVISDPDAETSEDILTKQFMRDDLDKVLDSLKPREKQV 1252
                                  EVI+DP+AET+E++L KQFM+ DL+KVL++L PRE QV
Sbjct: 470  ---------------NMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQV 514

Query: 1253 VR 1258
            VR
Sbjct: 515  VR 516


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  436 bits (1121), Expect = e-120
 Identities = 242/419 (57%), Positives = 280/419 (66%)
 Frame = +2

Query: 2    AKDAALMVNFSNSIIADTNPAATPYSKNYVSESSSLGQLADVGRLRELKSSEVSLGESHA 181
            A+DAAL+ N  NS  A T   ++P       + +   +      + E         E  A
Sbjct: 132  ARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDA 191

Query: 182  SHHPLSDSGDIXXXXXXXXXXXXXXXKSIAVRSSRQXXXXXXXXXXXXXXXXNVVXXXXX 361
                 ++S D+               +SI V+S RQ                +V+     
Sbjct: 192  LEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSG 251

Query: 362  XXXXXXXXXVQEVDYSDPLRYLRGTTSSSRLLTAAEEQQLSEGIQDLLKLERLQDELTQR 541
                     VQEVDYSDPLRYLR TT++SRLLTA EE +LSEGIQDLLKLERLQ+EL +R
Sbjct: 252  SSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGER 311

Query: 542  CGTQPTFTQWAAAAGVDQKTLRQRLNYGILCKDKMIKSNVRLVISIAKNYQGSGMNLQDL 721
             G +PTF QWAAAAGV+Q+TLR+RLNYG LCKDKMIKSN+RLVISIAKNYQG+GMNLQDL
Sbjct: 312  YGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDL 371

Query: 722  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIRQSVRKSLSDQSRTIRLPFHMVEATYRVK 901
            VQEGCRGLVRGAEKFDASKGFKFSTYAHWWI+Q+VRK LSDQSRTIRLPFHMVEATYRVK
Sbjct: 372  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVK 431

Query: 902  EARKHLFTENGRHPDDDEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGIXXXXXXXXXXX 1081
            EARK L  ENGRHPDD E+AEA GLSMKRL+AV++TPKAPRSL+QKIGI           
Sbjct: 432  EARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGI----------- 480

Query: 1082 XXXXXXXXXXXXXXXXXXXEVISDPDAETSEDILTKQFMRDDLDKVLDSLKPREKQVVR 1258
                               EVISDP+AET ED+L KQFM+ DL+KVLDSL PREKQV+R
Sbjct: 481  ------------NQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIR 527