BLASTX nr result

ID: Lithospermum22_contig00025169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025169
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   123   8e-26
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              123   8e-26
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   112   1e-22
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   111   3e-22

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  123 bits (308), Expect = 8e-26
 Identities = 55/106 (51%), Positives = 76/106 (71%)
 Frame = +3

Query: 3   DKVLHAIDLLHGMLDAGLQPDIVTCNIFLKTLKEKQYLPQSSNEFMDELAVQLYKRNNID 182
           + + HAIDLL+ MLD G  PD++TCNIFL  L+EK   PQ   EF+DEL V+L+KR  I 
Sbjct: 538 NSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIV 597

Query: 183 GASEIIAIMLKKLFHPKASTWQKIVGEIFKVKKIHEAINKCWKNIF 320
           GA++II +ML+K   P ASTW++I+ E+ K KK+   I+KCW ++F
Sbjct: 598 GAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 643


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  123 bits (308), Expect = 8e-26
 Identities = 55/106 (51%), Positives = 76/106 (71%)
 Frame = +3

Query: 3   DKVLHAIDLLHGMLDAGLQPDIVTCNIFLKTLKEKQYLPQSSNEFMDELAVQLYKRNNID 182
           + + HAIDLL+ MLD G  PD++TCNIFL  L+EK   PQ   EF+DEL V+L+KR  I 
Sbjct: 554 NSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIV 613

Query: 183 GASEIIAIMLKKLFHPKASTWQKIVGEIFKVKKIHEAINKCWKNIF 320
           GA++II +ML+K   P ASTW++I+ E+ K KK+   I+KCW ++F
Sbjct: 614 GAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 659


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  112 bits (281), Expect = 1e-22
 Identities = 52/104 (50%), Positives = 72/104 (69%)
 Frame = +3

Query: 9   VLHAIDLLHGMLDAGLQPDIVTCNIFLKTLKEKQYLPQSSNEFMDELAVQLYKRNNIDGA 188
           +  A+DLL+ MLD G  PD+VTCNIFL+ L+EK   PQ   +F+DEL V+L KR    GA
Sbjct: 549 ISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGA 608

Query: 189 SEIIAIMLKKLFHPKASTWQKIVGEIFKVKKIHEAINKCWKNIF 320
           S+I+ +ML+K   PKASTW ++V E+ + KKI   I+KCW  ++
Sbjct: 609 SKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWSKLY 652


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  112 bits (279), Expect = 2e-22
 Identities = 52/104 (50%), Positives = 70/104 (67%)
 Frame = +3

Query: 9   VLHAIDLLHGMLDAGLQPDIVTCNIFLKTLKEKQYLPQSSNEFMDELAVQLYKRNNIDGA 188
           +  AIDLL+ MLD G  PD+VTC IFL+ L+EK   PQ   EF+DEL V+L KR  + GA
Sbjct: 567 ISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGA 626

Query: 189 SEIIAIMLKKLFHPKASTWQKIVGEIFKVKKIHEAINKCWKNIF 320
           S+I+ +ML+KL  PK STW ++V  + K KK+   I KCW  ++
Sbjct: 627 SKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSILY 670


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  111 bits (277), Expect = 3e-22
 Identities = 52/104 (50%), Positives = 71/104 (68%)
 Frame = +3

Query: 9   VLHAIDLLHGMLDAGLQPDIVTCNIFLKTLKEKQYLPQSSNEFMDELAVQLYKRNNIDGA 188
           +  AIDLL+ MLD G  PD+VTC IFL+TL+EK   PQ   EF+D L V+L KR  + GA
Sbjct: 537 ISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGA 596

Query: 189 SEIIAIMLKKLFHPKASTWQKIVGEIFKVKKIHEAINKCWKNIF 320
           S+I+ +ML+KL  PK STW ++V ++   KK+  AI KCW  ++
Sbjct: 597 SKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


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