BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025167
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    73   5e-11
ref|NP_001064026.2| Os10g0106900 [Oryza sativa Japonica Group] g...    73   5e-11
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    73   5e-11
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...    73   5e-11
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    72   1e-10

>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
 Frame = -3

Query: 648 IPIFVGKYYAQWVDMMTKILIGYGLWDYVENGYDE---------SNWKMKQDNIKNDAKA 496
           +P+F G+ Y  W   M  +L+  GLWD VENGY E            K   ++  +DAKA
Sbjct: 6   VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 495 LGFIKRALSPAILQRIIHAAKAKEAWDILKREF-GNPKV 382
           L  I++ ++ ++  RII A K+KEAWD LK EF G+ KV
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKV 104


>ref|NP_001064026.2| Os10g0106900 [Oryza sativa Japonica Group]
           gi|255679164|dbj|BAF25940.2| Os10g0106900 [Oryza sativa
           Japonica Group]
          Length = 646

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
 Frame = -3

Query: 648 IPIFVGKYYAQWVDMMTKILIGYGLWDYVENGYDE---------SNWKMKQDNIKNDAKA 496
           +P+F G+ Y  W   M  +L+  GLWD VENGY E            K   ++  +DAKA
Sbjct: 6   VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 495 LGFIKRALSPAILQRIIHAAKAKEAWDILKREF-GNPKV 382
           L  I++ ++ ++  RII A K+KEAWD LK EF G+ KV
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKV 104


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711922|gb|ABF99717.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
 Frame = -3

Query: 648 IPIFVGKYYAQWVDMMTKILIGYGLWDYVENGYDE---------SNWKMKQDNIKNDAKA 496
           +P+F G+ Y  W   M  +L+  GLWD VENGY E            K   ++  +DAKA
Sbjct: 6   VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 495 LGFIKRALSPAILQRIIHAAKAKEAWDILKREF-GNPKV 382
           L  I++ ++ ++  RII A K+KEAWD LK EF G+ KV
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKV 104


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108708461|gb|ABF96256.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
 Frame = -3

Query: 648 IPIFVGKYYAQWVDMMTKILIGYGLWDYVENGYDE---------SNWKMKQDNIKNDAKA 496
           +P+F G+ Y  W   M  +L+  GLWD VENGY E            K   ++  +DAKA
Sbjct: 6   VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 495 LGFIKRALSPAILQRIIHAAKAKEAWDILKREF-GNPKV 382
           L  I++ ++ ++  RII A K+KEAWD LK EF G+ KV
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKV 104


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1198

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
 Frame = -3

Query: 648 IPIFVGKYYAQWVDMMTKILIGYGLWDYVENGYDE---------SNWKMKQDNIKNDAKA 496
           +P+F G+ Y  W   M  +L+  GLWD VENGY E            K   ++  +DAKA
Sbjct: 6   VPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKA 65

Query: 495 LGFIKRALSPAILQRIIHAAKAKEAWDILKREF 397
           L  I++ ++ ++  RII A K+KEAWD LK EF
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEF 98