BLASTX nr result

ID: Lithospermum22_contig00025151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025151
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34525.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003631379.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    57   2e-06
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...    56   3e-06

>emb|CBI34525.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = +3

Query: 126 KRRNSSPSLPTSCTSRSPTQDISSNSLALMDLKGILKDKLPIIIFNSHSRIKETQCCVCL 305
           KRR S+PS       RS  Q  +++ L+L+DLKG LK KLP I+F+   + +++QCCVCL
Sbjct: 31  KRRASTPSSTAPMLPRSMNQ--AASFLSLIDLKGELKGKLPTILFDEELKARDSQCCVCL 88

Query: 306 GE 311
           GE
Sbjct: 89  GE 90


>ref|XP_003631379.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Vitis vinifera]
          Length = 176

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +3

Query: 126 KRRNSSPSLPTSCTSRSPTQDISSNSLAL-MDLKGILKDKLPIIIFNSHSRIKETQCCVC 302
           KRR S+PS       RS  Q  S  SL+  +DLKG LK KLP I+F+   + +++QCCVC
Sbjct: 27  KRRASTPSSTAPMLPRSMNQAASFLSLSCEIDLKGELKGKLPTILFDEELKARDSQCCVC 86

Query: 303 LGE 311
           LGE
Sbjct: 87  LGE 89


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  SLQLKLYHAXXXXXXXXXXXXXXXXXXXXXXKRRNSSPSLPTSCTSRSPTQDISS-NSLA 209
           +LQLKLY A                      KRR +S S P+     S  Q      S+ 
Sbjct: 17  ALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQVLPTSSNQAAQQLPSVC 76

Query: 210 LMDLKGILKDKLPIIIFNSHSRIKETQCCVCLGE 311
            + LK  +KDKLPI++F+   + +E+QCCVCLGE
Sbjct: 77  QIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGE 110


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