BLASTX nr result

ID: Lithospermum22_contig00025144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025144
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]    77   2e-12
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]    73   3e-11
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    73   4e-11
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    67   2e-09
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    61   2e-07

>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 53/180 (29%), Positives = 70/180 (38%)
 Frame = +2

Query: 47  CSYCHKPGHDVTSCYAKNGYPDR*GERPKREXXXXXXXXXXXXXXXXPRMFWQQQQSSGN 226
           C +CHK GHD  +CY   GYP+                            +  Q ++ G 
Sbjct: 252 CPHCHKHGHDKNNCYEIVGYPEG---------------------------WLDQNKADGG 284

Query: 227 VGTFDSSSGFGRGKNGIVVNVVSSQEGAKIDFSGADSGQQGNGNAAGXXXXXXXXXXXXX 406
            G   S    GRG+     N  SS  GA    S  D                        
Sbjct: 285 AGR--SRQQAGRGRGSARANAASSTIGASSTKSSTDQ----------LFTPEQWKALAGL 332

Query: 407 XXXXXTSDARLIGKSFISSWIVDMGATNHVTGNLHLLHNIVDMIECPVGLPDGRTSICTR 586
                  D RL GK    SWI+D GAT+HVTG+L  L + + + ECPVGLP+G + + T+
Sbjct: 333 IGNAQVPDDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECPVGLPNGESVVATQ 392


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 52/180 (28%), Positives = 69/180 (38%)
 Frame = +2

Query: 47  CSYCHKPGHDVTSCYAKNGYPDR*GERPKREXXXXXXXXXXXXXXXXPRMFWQQQQSSGN 226
           C +CHK GHD  +CY   GYP+                            +  Q ++ G 
Sbjct: 284 CPHCHKHGHDKNNCYEIVGYPEG---------------------------WLDQNKADGG 316

Query: 227 VGTFDSSSGFGRGKNGIVVNVVSSQEGAKIDFSGADSGQQGNGNAAGXXXXXXXXXXXXX 406
            G   S    GRG+     N  SS  GA    S  D                        
Sbjct: 317 AGR--SRQQAGRGRGSARXNTASSTIGASSTKSSTDQ----------LFTPEQWKALAGL 364

Query: 407 XXXXXTSDARLIGKSFISSWIVDMGATNHVTGNLHLLHNIVDMIECPVGLPDGRTSICTR 586
                    RL GK    SWI+D GAT+HVTG+L  L + + + ECPVGLP+G + + T+
Sbjct: 365 IGNAQVPYDRLNGKFDTKSWIIDTGATHHVTGDLXWLFDTIALFECPVGLPNGESIVATQ 424


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 4/177 (2%)
 Frame = +2

Query: 47  CSYCHKPGHDVTSCYAKNGYPDR*GERPKREXXXXXXXXXXXXXXXXPRMFWQQQQSSGN 226
           CS C + GH+V SC+ +  YP+  G+RP+                           S G+
Sbjct: 218 CSNCKRKGHEVDSCFQRIAYPEWWGDRPRTTTSGC---------------------SGGH 256

Query: 227 VGTFDSSSGFGRGKNGI----VVNVVSSQEGAKIDFSGADSGQQGNGNAAGXXXXXXXXX 394
                  +G GRG+ G     VV  + +  G  +     DS + G    +G         
Sbjct: 257 GRGVQQGTGGGRGRGGTARANVVQTLGTDGGRSVV---TDSNRTG---ISGLSDKQWTTL 310

Query: 395 XXXXXXXXXTSDARLIGKSFISSWIVDMGATNHVTGNLHLLHNIVDMIECPVGLPDG 565
                     ++ RLIGK  I  WI+D GA++H+T     L+++ D+I CPVGLP+G
Sbjct: 311 LTMLNSHKGGANERLIGKQNILPWIIDTGASHHMTDTYECLNDLRDIIPCPVGLPNG 367


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 3/190 (1%)
 Frame = +2

Query: 26  DSRPRSTCSYCHKPGHDVTSCYAKNGYPDR*GERPKREXXXXXXXXXXXXXXXXPRMFWQ 205
           DS     CS C + GH    C+   GYP    E+ + +                      
Sbjct: 251 DSSENRVCSNCGRVGHLAEQCFKLIGYPPWLEEKLRLKNTA------------------- 291

Query: 206 QQQSSGNVGTFDSSSGFGRGKNGIVVNVVSSQEGAKIDFSGADSGQQGNGNA---AGXXX 376
              S G + +F      GRG +  + +V SS   A +  + + +    + +    +G   
Sbjct: 292 -SSSRGGLSSFKGKQSHGRGSS--INHVASSGMAANVVTNSSLTSPLTSDDRIGLSGLND 348

Query: 377 XXXXXXXXXXXXXXXTSDARLIGKSFISSWIVDMGATNHVTGNLHLLHNIVDMIECPVGL 556
                          TS+    GK F+ SWI+D GATNH+TG+L  L N+ DM    + L
Sbjct: 349 SQWKILQTILEERKSTSNDHQSGKYFLESWIIDSGATNHMTGSLAFLRNVCDMPPVLIKL 408

Query: 557 PDGRTSICTR 586
           PDGR +  T+
Sbjct: 409 PDGRFTTATK 418


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = +2

Query: 428 DARLIGKSFISSWIVDMGATNHVTGNLHLLHNIVDMIECPVGLPDGRTSICTR 586
           D RL GK    SWI+D GAT+HVTG+L  L + + + ECPVGLP+G + + T+
Sbjct: 40  DDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECPVGLPNGESVVATQ 92


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