BLASTX nr result
ID: Lithospermum22_contig00025126
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00025126 (617 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002892836.1| hypothetical protein ARALYDRAFT_888880 [Arab... 84 2e-14 emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana] 80 2e-13 ref|NP_172943.1| high mobility group protein A [Arabidopsis thal... 80 4e-13 gb|AAF22135.1|AF127919_1 high mobility group protein I/Y [Brassi... 75 7e-12 emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera] 75 7e-12 >ref|XP_002892836.1| hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] gi|297338678|gb|EFH69095.1| hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] Length = 202 Score = 84.3 bits (207), Expect = 2e-14 Identities = 42/78 (53%), Positives = 52/78 (66%) Frame = -2 Query: 571 SSMANLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQN 392 S +LPP PEMIM AIE+LN+K G K+TI HIES +LP + LLS HL ++K+N Sbjct: 19 SPSISLPPYPEMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHTTLLSYHLNQMKKN 78 Query: 391 GQLTMVNDCYKKVDSDVP 338 GQL MV + Y K D D P Sbjct: 79 GQLIMVKNNYMKPDPDAP 96 >emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana] Length = 204 Score = 80.5 bits (197), Expect = 2e-13 Identities = 39/74 (52%), Positives = 50/74 (67%) Frame = -2 Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380 +LPP P+MIM AIE+LN+K G K+TI HIES +LP + LLS HL ++K+ GQL Sbjct: 22 SLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHTTLLSYHLNQMKKTGQLI 81 Query: 379 MVNDCYKKVDSDVP 338 MV + Y K D D P Sbjct: 82 MVKNNYMKPDPDAP 95 >ref|NP_172943.1| high mobility group protein A [Arabidopsis thaliana] gi|8778223|gb|AAF79232.1|AC006917_17 F10B6.31 [Arabidopsis thaliana] gi|1429211|emb|CAA67564.1| HMG-I/Y protein [Arabidopsis thaliana] gi|2809402|gb|AAB97739.1| high mobility group protein a [Arabidopsis thaliana] gi|28466927|gb|AAO44072.1| At1g14900 [Arabidopsis thaliana] gi|222423915|dbj|BAH19921.1| AT1G14900 [Arabidopsis thaliana] gi|332191119|gb|AEE29240.1| high mobility group protein A [Arabidopsis thaliana] Length = 204 Score = 79.7 bits (195), Expect = 4e-13 Identities = 39/74 (52%), Positives = 49/74 (66%) Frame = -2 Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380 +LPP P+MIM AIE+LN+K G K+TI HIES +LP LLS HL ++K+ GQL Sbjct: 22 SLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLI 81 Query: 379 MVNDCYKKVDSDVP 338 MV + Y K D D P Sbjct: 82 MVKNNYMKPDPDAP 95 >gb|AAF22135.1|AF127919_1 high mobility group protein I/Y [Brassica napus] Length = 203 Score = 75.5 bits (184), Expect = 7e-12 Identities = 37/74 (50%), Positives = 46/74 (62%) Frame = -2 Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380 +LPP P+MIM AIE N+ G K+ I HIES TSLP LLS HL ++KQ+GQ+ Sbjct: 24 SLPPYPQMIMEAIEASNDANGCNKTAIAKHIESTQTSLPPSHMTLLSYHLNQMKQSGQIA 83 Query: 379 MVNDCYKKVDSDVP 338 MV + Y K D P Sbjct: 84 MVKNNYMKPDPQAP 97 >emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera] Length = 182 Score = 75.5 bits (184), Expect = 7e-12 Identities = 37/75 (49%), Positives = 50/75 (66%) Frame = -2 Query: 562 ANLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQL 383 +++P EMIM AIE LN+K+GS KS+I +IES Y LP S LL+ HL ++KQ+G L Sbjct: 14 SSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDL 73 Query: 382 TMVNDCYKKVDSDVP 338 MV + Y K D + P Sbjct: 74 VMVKNNYMKPDPNAP 88