BLASTX nr result

ID: Lithospermum22_contig00025126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00025126
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892836.1| hypothetical protein ARALYDRAFT_888880 [Arab...    84   2e-14
emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana]                         80   2e-13
ref|NP_172943.1| high mobility group protein A [Arabidopsis thal...    80   4e-13
gb|AAF22135.1|AF127919_1 high mobility group protein I/Y [Brassi...    75   7e-12
emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]    75   7e-12

>ref|XP_002892836.1| hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp.
           lyrata] gi|297338678|gb|EFH69095.1| hypothetical protein
           ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata]
          Length = 202

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -2

Query: 571 SSMANLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQN 392
           S   +LPP PEMIM AIE+LN+K G  K+TI  HIES   +LP   + LLS HL ++K+N
Sbjct: 19  SPSISLPPYPEMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHTTLLSYHLNQMKKN 78

Query: 391 GQLTMVNDCYKKVDSDVP 338
           GQL MV + Y K D D P
Sbjct: 79  GQLIMVKNNYMKPDPDAP 96


>emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana]
          Length = 204

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = -2

Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380
           +LPP P+MIM AIE+LN+K G  K+TI  HIES   +LP   + LLS HL ++K+ GQL 
Sbjct: 22  SLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHTTLLSYHLNQMKKTGQLI 81

Query: 379 MVNDCYKKVDSDVP 338
           MV + Y K D D P
Sbjct: 82  MVKNNYMKPDPDAP 95


>ref|NP_172943.1| high mobility group protein A [Arabidopsis thaliana]
           gi|8778223|gb|AAF79232.1|AC006917_17 F10B6.31
           [Arabidopsis thaliana] gi|1429211|emb|CAA67564.1|
           HMG-I/Y protein [Arabidopsis thaliana]
           gi|2809402|gb|AAB97739.1| high mobility group protein a
           [Arabidopsis thaliana] gi|28466927|gb|AAO44072.1|
           At1g14900 [Arabidopsis thaliana]
           gi|222423915|dbj|BAH19921.1| AT1G14900 [Arabidopsis
           thaliana] gi|332191119|gb|AEE29240.1| high mobility
           group protein A [Arabidopsis thaliana]
          Length = 204

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = -2

Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380
           +LPP P+MIM AIE+LN+K G  K+TI  HIES   +LP     LLS HL ++K+ GQL 
Sbjct: 22  SLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLI 81

Query: 379 MVNDCYKKVDSDVP 338
           MV + Y K D D P
Sbjct: 82  MVKNNYMKPDPDAP 95


>gb|AAF22135.1|AF127919_1 high mobility group protein I/Y [Brassica napus]
          Length = 203

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/74 (50%), Positives = 46/74 (62%)
 Frame = -2

Query: 559 NLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQLT 380
           +LPP P+MIM AIE  N+  G  K+ I  HIES  TSLP     LLS HL ++KQ+GQ+ 
Sbjct: 24  SLPPYPQMIMEAIEASNDANGCNKTAIAKHIESTQTSLPPSHMTLLSYHLNQMKQSGQIA 83

Query: 379 MVNDCYKKVDSDVP 338
           MV + Y K D   P
Sbjct: 84  MVKNNYMKPDPQAP 97


>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = -2

Query: 562 ANLPPVPEMIMTAIETLNEKTGSEKSTIQTHIESNYTSLPVDFSDLLSTHLEELKQNGQL 383
           +++P   EMIM AIE LN+K+GS KS+I  +IES Y  LP   S LL+ HL ++KQ+G L
Sbjct: 14  SSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDL 73

Query: 382 TMVNDCYKKVDSDVP 338
            MV + Y K D + P
Sbjct: 74  VMVKNNYMKPDPNAP 88


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